RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 IGFBP7Q16270 282 aa12.64□□□□□ -0.39
LINC00475-202ENST00000416438 TIPARPQ7Z3E1 657 aaKnown RBP12.64□□□□□ -0.39
LINC00475-202ENST00000416438 WDR5BQ86VZ2 330 aa12.64□□□□□ -0.39
LINC00475-202ENST00000416438 SELENOHQ8IZQ5 122 aaKnown RBP12.64□□□□□ -0.39
LINC00475-202ENST00000416438 NEK7Q8TDX7 302 aa12.64□□□□□ -0.39
LINC00475-202ENST00000416438 SPSB4Q96A44 273 aa12.64□□□□□ -0.39
LINC00475-202ENST00000416438 C11orf1Q9H5F2 150 aa12.64□□□□□ -0.39
LINC00475-202ENST00000416438 KCNJ16Q9NPI9 418 aa12.64□□□□□ -0.39
LINC00475-202ENST00000416438 CCL28Q9NRJ3 127 aa12.64□□□□□ -0.39
LINC00475-202ENST00000416438 ZDBF2Q9HCK1 2354 aa12.64□□□□□ -0.39
LINC00475-202ENST00000416438 PROB1E7EW31 1015 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 TMEM50AO95807 157 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 NGFP01138 241 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 LMO1P25800 156 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 CYB561P49447 251 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 EIF2S3LQ2VIR3 472 aaKnown RBP12.63□□□□□ -0.39
LINC00475-202ENST00000416438 UBALD2Q8IYN6 164 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 LILRB1Q8NHL6 650 aaPredicted RBP12.63□□□□□ -0.39
LINC00475-202ENST00000416438 ZNF488Q96MN9 340 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 CALHM2Q9HA72 323 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 Q9N2K0 584 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 MTCH1Q9NZJ7 389 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 PUS1Q9Y606 427 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC00475-202ENST00000416438 SLC22A20A6NK97 555 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 TDGF1P13385 188 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 GFRA1P56159 465 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 TRA2AQ13595 282 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC00475-202ENST00000416438 LPAL2Q16609 132 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 ADAM5Q6NVV9 412 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 SLC16A13Q7RTY0 426 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 TUSC5Q8IXB3 177 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 ODF3L1Q8IXM7 274 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 COMMD1Q8N668 190 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 TMEM252Q8N6L7 170 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 ZNF565Q8N9K5 539 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 HES7Q9BYE0 225 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 SLC35B3Q9H1N7 401 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 PLSCR2Q9NRY7 297 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 GLRX2Q9NS18 164 aa12.63□□□□□ -0.39
LINC00475-202ENST00000416438 STRAPQ9Y3F4 350 aaKnown RBP12.63□□□□□ -0.39
LINC00475-202ENST00000416438 IGKV1-6A0A0C4DH72 117 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 ZNF732B4DXR9 585 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 MT-ND4LP03901 98 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 TK1P04183 234 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 EPHA1P21709 976 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 HOXA6P31267 233 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 SULT1A1P50225 295 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 CEBPGP53567 150 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 RUNX1Q01196 453 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 FOXO1Q12778 655 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 OR5C1Q8NGR4 320 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 NANPQ8TBE9 248 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 CPNE4Q96A23 557 aaPredicted RBP12.62□□□□□ -0.39
LINC00475-202ENST00000416438 REPIN1Q9BWE0 567 aaKnown RBP12.62□□□□□ -0.39
LINC00475-202ENST00000416438 PRDM14Q9GZV8 571 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 C5orf52A6NGY3 159 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 LINC01387J3KSC0 135 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 SYNGR1O43759 233 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 CDS2O95674 445 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 IFNA4P05014 189 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 S100A6P06703 90 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 RAB5CP51148 216 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 OR2B8PP59922 312 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 C20orf204Q6ZNR8 217 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 COLCA1Q6ZS62 124 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 PSMF1Q92530 271 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 OR51B6Q9H340 312 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 ZNF407Q9C0G0 2248 aa12.62□□□□□ -0.39
LINC00475-202ENST00000416438 YKT6O15498 198 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 PAX6P26367 422 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 TMEM56Q96MV1 263 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 ZNF552Q9H707 407 aaPredicted RBP12.61□□□□□ -0.39
LINC00475-202ENST00000416438 LRFN1Q9P244 771 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 R4GN57 208 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 TMEM56-RWDD3S4R434 201 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 HS3ST1O14792 307 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 LAMTOR5O43504 91 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 NAPSAO96009 420 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 FBP1P09467 338 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 ZNF14P17017 642 aaPredicted RBP12.61□□□□□ -0.39
LINC00475-202ENST00000416438 AGAP20933 346 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 DYNLT3P51808 116 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 VAMP2P63027 116 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 IZUMO4Q1ZYL8 232 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 TMEM105Q8N8V8 129 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 CT55Q8WUE5 264 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 PBDC1Q9BVG4 233 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 PLEKHF2Q9H8W4 249 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 FAM86C1Q9NVL1 165 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 PCSK5Q92824 1860 aa12.61□□□□□ -0.39
LINC00475-202ENST00000416438 ATXN7O15265 892 aaPredicted RBP12.6□□□□□ -0.39
LINC00475-202ENST00000416438 LILRA1O75019 489 aa12.6□□□□□ -0.39
LINC00475-202ENST00000416438 RAB5AP20339 215 aa12.6□□□□□ -0.39
LINC00475-202ENST00000416438 DUSP3P51452 185 aaPredicted RBP12.6□□□□□ -0.39
LINC00475-202ENST00000416438 FGF12P61328 243 aa12.6□□□□□ -0.39
LINC00475-202ENST00000416438 CTAG1AP78358 180 aa12.6□□□□□ -0.39
LINC00475-202ENST00000416438 HAGHQ16775 308 aa12.6□□□□□ -0.39
LINC00475-202ENST00000416438 SPSB3Q6PJ21 355 aa12.6□□□□□ -0.39
LINC00475-202ENST00000416438 MRPL21Q7Z2W9 205 aaKnown RBP12.6□□□□□ -0.39
LINC00475-202ENST00000416438 ZNF561Q8N587 486 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms