RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 GABRPO00591 440 aa14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 WBP4O75554 376 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 SOX2P48431 317 aa14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 PAN3Q58A45 887 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 ASCL4Q6XD76 172 aa14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 TMPRSS11AQ6ZMR5 421 aa14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 LYG1Q8N1E2 194 aa14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 Q8NFD4 153 aa14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 OR4F17Q8NGA8 305 aa14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 CNIH3Q8TBE1 160 aa14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 OR4F4Q96R69 305 aa14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 PPIL3Q9H2H8 161 aaKnown RBP14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.09□□□□□ -0.15
PDLIM2-208ENST00000416159 TRAV24A0A0B4J272 114 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 FAM172BPA6NC97 362 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 OOSP1A8MZH6 123 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 G3V4G9 280 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 BUB1B-PAK6H3BSN5 160 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 XPNPEP2O43895 674 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 CGB3P0DN86 165 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 CGB7P0DN87 165 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 C21orf33P30042 268 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 KCNJ3P48549 501 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 RSU1Q15404 277 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 SMN1Q16637 294 aaKnown RBP14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 ZSCAN26Q16670 478 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 BEAN1Q3B7T3 259 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 TPTE2P1Q5T6R2 138 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 SAMD5Q5TGI4 173 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 CCDC144NLQ6NUI1 221 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 OR51A2Q8NGJ7 313 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 RGP1Q92546 391 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 R3HDM4Q96D70 268 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 CITED2Q99967 270 aaPredicted RBP14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 TAS2R4Q9NYW5 299 aa14.08□□□□□ -0.16
PDLIM2-208ENST00000416159 NOTCH3Q9UM47 2321 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 MEIKINA0A087WXM9 373 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 LY6LH3BQJ8 138 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 HSPB6O14558 160 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 OR2F2O95006 317 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 CD24P25063 80 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 NFYBP25208 207 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 MNDAP41218 407 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 GLP1RP43220 463 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 ETV1P50549 477 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 OR9G1Q8NH87 305 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 TMEM106AQ96A25 262 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 KIRREL1Q96J84 757 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 RBM14Q96PK6 669 aaKnown RBP14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 SLC25A33Q9BSK2 321 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 FAM192AQ9GZU8 254 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 KIF25Q9UIL4 384 aa14.07□□□□□ -0.16
PDLIM2-208ENST00000416159 ADARB2-AS1A8MUL3 147 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 OGG1O15527 345 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 HTR3BO95264 441 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 OR3A4PP47883 348 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 PPP3R1P63098 170 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 PAX5Q02548 391 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 RBM39Q14498 530 aaKnown RBP14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 TMEM95Q3KNT9 176 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 KPRPQ5T749 579 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 OR2G6Q5TZ20 316 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 XAF1Q6GPH4 301 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 CENPVQ7Z7K6 275 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 OR5AU1Q8NGC0 362 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 OR13A1Q8NGR1 328 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 OR10K1Q8NGX5 313 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 METTL9Q9H1A3 318 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 MMP28Q9H239 520 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 LINC00574Q9H8X3 128 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 TMEM138Q9NPI0 162 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 PCDHB16Q9NRJ7 776 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 BABAM2Q9NXR7 383 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 CALYQ9NYX4 217 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 IDI2-AS1Q9NZ38 188 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 ING4Q9UNL4 249 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 ZNF281Q9Y2X9 895 aa14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 EXOSC1Q9Y3B2 195 aaKnown RBP14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 AMMECR1Q9Y4X0 333 aaPredicted RBP14.06□□□□□ -0.16
PDLIM2-208ENST00000416159 M0QZK8 103 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 IL1AP01583 271 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 MYL12AP19105 171 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 CD83Q01151 205 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 MED21Q13503 144 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 PIGYQ3MUY2 71 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 RSBN1Q5VWQ0 802 aaPredicted RBP14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 TTC23Q5W5X9 447 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 THNSL2Q86YJ6 484 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 OR10A7Q8NGE5 316 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 RPEQ96AT9 228 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 S100A13Q99584 98 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 C8orf4Q9NR00 106 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 CHCHD3Q9NX63 227 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 IL36GQ9NZH8 169 aa14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 DIMT1Q9UNQ2 313 aaKnown RBP14.05□□□□□ -0.16
PDLIM2-208ENST00000416159 TGP01266 2768 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 NPIPB11E5RHQ5 1161 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 J3QR06 171 aa14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 CSTBP04080 98 aaKnown RBP14.04□□□□□ -0.16
PDLIM2-208ENST00000416159 BDKRB2P30411 391 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms