RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 MRPS18CQ9Y3D5 142 aaKnown RBP8.44□□□□□ -1.06
CD44-206ENST00000415148 FAM24AA6NFZ4 105 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 H0YL77 283 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 KLF7O75840 302 aaPredicted RBP8.44□□□□□ -1.06
CD44-206ENST00000415148 OR2C1O95371 312 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 S100PP25815 95 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 PLA2G5P39877 138 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 NKX2-1P43699 371 aaPredicted RBP8.44□□□□□ -1.06
CD44-206ENST00000415148 ZNF92Q03936 586 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 PLCXD3Q63HM9 321 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 SUMF1Q8NBK3 374 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 PRDM14Q9GZV8 571 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 WNT5BQ9H1J7 359 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 ZNF442Q9H7R0 627 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 HS3ST3B1Q9Y662 390 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 URGCP-MRPS24S4R325 110 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 KIAA1549Q9HCM3 1950 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 CCDC163A0A0D9SF12 145 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 ZNF732B4DXR9 585 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 C9J4A7 227 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 ZNHIT1O43257 154 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 NXPH3O95157 252 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 OMGP23515 440 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 GNRHRP30968 328 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 NTF4P34130 210 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 RPS10P46783 165 aaKnown RBP8.43□□□□□ -1.06
CD44-206ENST00000415148 BAXQ07812 192 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 TRA2AQ13595 282 aaKnown RBP eCLIP8.43□□□□□ -1.06
CD44-206ENST00000415148 PDZD11Q5EBL8 140 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 SOHLH1Q5JUK2 328 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 ABLIM2Q6H8Q1 611 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 SPSB3Q6PJ21 355 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 UNQ6494/PRO21346Q6UXR6 183 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 ZNF695Q8IW36 515 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 ZFP62Q8NB50 900 aaPredicted RBP8.43□□□□□ -1.06
CD44-206ENST00000415148 OR2Y1Q8NGV0 311 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 TCTEX1D2Q8WW35 142 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 PIGCQ92535 297 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 MUCL1Q96DR8 90 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 GNPNAT1Q96EK6 184 aaPredicted RBP8.43□□□□□ -1.06
CD44-206ENST00000415148 RHOVQ96L33 236 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 C1QTNF5Q9BXJ0 243 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 LYRM2Q9NU23 88 aaPredicted RBP8.43□□□□□ -1.06
CD44-206ENST00000415148 TCFL5Q9UL49 500 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 NKX2-6A6NCS4 301 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 RBFOX3A6NFN3 312 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 IFNA17P01571 189 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 IGHEP01854 428 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 CTXN2P0C2S0 81 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 EPHA1P21709 976 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 IGFBP4P22692 258 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 NDUFA6P56556 154 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 KIAA0141Q14154 515 aaPredicted RBP8.43□□□□□ -1.06
CD44-206ENST00000415148 HIKESHIQ53FT3 197 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 LYSMD4Q5XG99 296 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 SP5Q6BEB4 398 aaPredicted RBP8.43□□□□□ -1.06
CD44-206ENST00000415148 DPPA3Q6W0C5 159 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 GGNQ86UU5 652 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 ODF3L1Q8IXM7 274 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 SELENOHQ8IZQ5 122 aaKnown RBP8.43□□□□□ -1.06
CD44-206ENST00000415148 SUMF2Q8NBJ7 301 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 OR2G3Q8NGZ4 309 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 Q8WTZ3 238 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 TMEM171Q8WVE6 324 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 IL22RA2Q969J5 263 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 GPR35Q9HC97 309 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 PARPBPQ9NWS1 579 aa8.43□□□□□ -1.06
CD44-206ENST00000415148 UBE2J1Q9Y385 318 aaPredicted RBP8.43□□□□□ -1.06
CD44-206ENST00000415148 A0A087WWC5 75 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 TGIF2-C20orf24A0A0A6YYL0 155 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 IGSF23A1L1A6 192 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 ZNF724A8MTY0 619 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 YKT6O15498 198 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 TK1P04183 234 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 P04436 131 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 CEACAM1P13688 526 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 B4GALT1P15291 398 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 HOXA5P20719 270 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 ATP6V0CP27449 155 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 HAAOP46952 286 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 ERVFRD-1P60508 538 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 ID3Q02535 119 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 CEACAM16Q2WEN9 425 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 MEX3BQ6ZN04 569 aaKnown RBP8.42□□□□□ -1.06
CD44-206ENST00000415148 COLCA1Q6ZS62 124 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 TBC1D26Q86UD7 250 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 ZNF611Q8N823 705 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 RAB39BQ96DA2 213 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 ADGRG7Q96K78 797 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 MAGT1Q9H0U3 335 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 PRO3102Q9H379 93 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 TMPRSS5Q9H3S3 457 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 UBE2ZQ9H832 354 aaPredicted RBP8.42□□□□□ -1.06
CD44-206ENST00000415148 Q9N2K0 584 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 KIAA1456Q9P272 454 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 G3V3Y1 287 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 MMP7P09237 267 aaPredicted RBP8.42□□□□□ -1.06
CD44-206ENST00000415148 PATE4P0C8F1 98 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 VDAC1P21796 283 aa8.42□□□□□ -1.06
CD44-206ENST00000415148 GPX4P36969 197 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms