RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 NPY4RP50391 375 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 RBM39Q14498 530 aaKnown RBP11.02□□□□□ -0.65
CNN3-203ENST00000415017 ZNF79Q15937 498 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 Q5PR19 223 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 TMEM69Q5SWH9 247 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 OLFML2AQ68BL7 652 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 SLC35E4Q6ICL7 350 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 ZNF880Q6PDB4 577 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 ZNF497Q6ZNH5 498 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 OR5D13Q8NGL4 314 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 C15orf40Q8WUR7 153 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 DACT3Q96B18 629 aaPredicted RBP11.02□□□□□ -0.65
CNN3-203ENST00000415017 NEDD4LQ96PU5 975 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 FAAP24Q9BTP7 215 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 PLEKHJ1Q9NW61 149 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 ELF5Q9UKW6 265 aaPredicted RBP11.02□□□□□ -0.65
CNN3-203ENST00000415017 ANAPC10Q9UM13 185 aa11.02□□□□□ -0.65
CNN3-203ENST00000415017 FLNAP21333 2647 aaKnown RBP11.01□□□□□ -0.65
CNN3-203ENST00000415017 IGHV4-61A0A0C4DH41 118 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 A0A0G2JMP0 313 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 A0A0X1KG70 313 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 FABP12A6NFH5 140 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 NKX6-3A6NJ46 265 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 KIAA1324LA8MWY0 1029 aaPredicted RBP11.01□□□□□ -0.65
CNN3-203ENST00000415017 FAM25AB3EWG3 89 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 FAM25CB3EWG5 89 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 FAM25GB3EWG6 89 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 MCRIP1C9JLW8 97 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 DVL1O14640 695 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 MT-ND4P03905 459 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 CGB3P0DN86 165 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 CGB7P0DN87 165 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 GNB3P16520 340 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 ZNF45Q02386 682 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 PAX2Q02962 417 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 LOXL1Q08397 574 aaPredicted RBP11.01□□□□□ -0.65
CNN3-203ENST00000415017 SRSF7Q16629 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
CNN3-203ENST00000415017 PAN3Q58A45 887 aaKnown RBP11.01□□□□□ -0.65
CNN3-203ENST00000415017 ATAD3CQ5T2N8 411 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 PYHIN1Q6K0P9 492 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 BRICD5Q6PL45 260 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 Q6ZS49 121 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 FGFRL1Q8N441 504 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 BPIFB2Q8N4F0 458 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 OR4M2Q8NGB6 313 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 C8orf46Q8TAG6 207 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 PPP1R35Q8TAP8 253 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 DYRK2Q92630 601 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 DMRTB1Q96MA1 342 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 PPA2Q9H2U2 334 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 AK3Q9UIJ7 227 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 CREBBPQ92793 2442 aa11.01□□□□□ -0.65
CNN3-203ENST00000415017 SULT1C2O00338 296 aa11□□□□□ -0.65
CNN3-203ENST00000415017 GSTZ1O43708 216 aaPredicted RBP11□□□□□ -0.65
CNN3-203ENST00000415017 RPS2P15880 293 aaKnown RBP11□□□□□ -0.65
CNN3-203ENST00000415017 TALDO1P37837 337 aa11□□□□□ -0.65
CNN3-203ENST00000415017 SEC61A1P61619 476 aaKnown RBP11□□□□□ -0.65
CNN3-203ENST00000415017 SCN1BQ07699 218 aa11□□□□□ -0.65
CNN3-203ENST00000415017 CARTPTQ16568 116 aa11□□□□□ -0.65
CNN3-203ENST00000415017 WDR25Q64LD2 544 aaPredicted RBP11□□□□□ -0.65
CNN3-203ENST00000415017 IZUMO1Q8IYV9 350 aa11□□□□□ -0.65
CNN3-203ENST00000415017 DTX3Q8N9I9 347 aa11□□□□□ -0.65
CNN3-203ENST00000415017 LY6G5BQ8NDX9 201 aa11□□□□□ -0.65
CNN3-203ENST00000415017 MRPL30Q8TCC3 161 aaKnown RBP11□□□□□ -0.65
CNN3-203ENST00000415017 GPX8Q8TED1 209 aa11□□□□□ -0.65
CNN3-203ENST00000415017 CORO2AQ92828 525 aa11□□□□□ -0.65
CNN3-203ENST00000415017 PHF21AQ96BD5 680 aa11□□□□□ -0.65
CNN3-203ENST00000415017 SDHCQ99643 169 aaPredicted RBP11□□□□□ -0.65
CNN3-203ENST00000415017 OCSTAMPQ9BR26 566 aa11□□□□□ -0.65
CNN3-203ENST00000415017 SRRQ9GZT4 340 aa11□□□□□ -0.65
CNN3-203ENST00000415017 CHST6Q9GZX3 395 aa11□□□□□ -0.65
CNN3-203ENST00000415017 RIMS4Q9H426 269 aaPredicted RBP11□□□□□ -0.65
CNN3-203ENST00000415017 LINC00574Q9H8X3 128 aa11□□□□□ -0.65
CNN3-203ENST00000415017 ZMAT3Q9HA38 289 aaKnown RBP11□□□□□ -0.65
CNN3-203ENST00000415017 SCPEP1Q9HB40 452 aa11□□□□□ -0.65
CNN3-203ENST00000415017 MBNL3Q9NUK0 354 aaKnown RBP11□□□□□ -0.65
CNN3-203ENST00000415017 SLC25A10Q9UBX3 287 aaPredicted RBP11□□□□□ -0.65
CNN3-203ENST00000415017 RBMX2Q9Y388 322 aaKnown RBP11□□□□□ -0.65
CNN3-203ENST00000415017 MAST4O15021 2626 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 UBE2QL1A1L167 161 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 MEIOCA2RUB1 952 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 ISPDA4D126 451 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 TMEM235A6NFC5 223 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 NDUFB3O43676 98 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 PTHLHP12272 177 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 NAT1P18440 290 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 DTYMKP23919 212 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 P2RX3P56373 397 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 MRPS10P82664 201 aaKnown RBP10.99□□□□□ -0.65
CNN3-203ENST00000415017 PITPNAQ00169 270 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 MEF2CQ06413 473 aaPredicted RBP10.99□□□□□ -0.65
CNN3-203ENST00000415017 AESQ08117 197 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 GRK1Q15835 563 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 LRRC10Q5BKY1 277 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 NKAPLQ5M9Q1 402 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 SPANXN2Q5MJ10 180 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 NLRC3Q7RTR2 1065 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 TCF23Q7RTU1 214 aa10.99□□□□□ -0.65
CNN3-203ENST00000415017 ASCC1Q8N9N2 400 aaKnown RBP10.99□□□□□ -0.65
CNN3-203ENST00000415017 OR8B3Q8NGG8 313 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms