RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 FAM122AQ96E09 287 aa10.42□□□□□ -0.74
PTPRF-205ENST00000414879 OR2J1Q9GZK6 312 aa10.42□□□□□ -0.74
PTPRF-205ENST00000414879 SLC35D1Q9NTN3 355 aa10.42□□□□□ -0.74
PTPRF-205ENST00000414879 OSGIN2Q9Y236 505 aa10.42□□□□□ -0.74
PTPRF-205ENST00000414879 WIPI2Q9Y4P8 454 aa10.42□□□□□ -0.74
PTPRF-205ENST00000414879 GREB1Q4ZG55 1949 aa10.42□□□□□ -0.74
PTPRF-205ENST00000414879 SOCS1O15524 211 aa10.42□□□□□ -0.74
PTPRF-205ENST00000414879 FGF7P21781 194 aa10.42□□□□□ -0.74
PTPRF-205ENST00000414879 NANOS3P60323 173 aaKnown RBP10.42□□□□□ -0.74
PTPRF-205ENST00000414879 POMT1Q9Y6A1 747 aa10.42□□□□□ -0.74
PTPRF-205ENST00000414879 KLF9Q13886 244 aaPredicted RBP10.42□□□□□ -0.74
PTPRF-205ENST00000414879 HIST2H3PS2Q5TEC6 136 aa10.42□□□□□ -0.74
PTPRF-205ENST00000414879 FNDC1Q4ZHG4 1894 aaPredicted RBP10.42□□□□□ -0.74
PTPRF-205ENST00000414879 NTN1O95631 604 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 ST3GAL2Q16842 350 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 CDCP2Q5VXM1 449 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 ZFP82Q8N141 532 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 OR2C3Q8N628 320 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 OR1L4Q8NGR5 311 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 HIF1ANQ9NWT6 349 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 ZNF230Q9UIE0 474 aaPredicted RBP10.41□□□□□ -0.74
PTPRF-205ENST00000414879 FZR1Q9UM11 496 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 LIPGQ9Y5X9 500 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 LHFPL6Q9Y693 200 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 A0A1B0GU03 582 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 C3orf80F5H4A9 247 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 TMPRSS2O15393 492 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 MPC2O95563 127 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 UBE2G2P60604 165 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 ZNF596Q8TC21 504 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 GRAMD2BQ96HH9 432 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 AP1S3Q96PC3 154 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 TMEM147Q9BVK8 224 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 CLN8Q9UBY8 286 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 SLC45A2Q9UMX9 530 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 KLHDC2Q9Y2U9 406 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 TANC1Q9C0D5 1861 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 CRYBA1P05813 215 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 RPS10P46783 165 aaKnown RBP10.41□□□□□ -0.74
PTPRF-205ENST00000414879 CLLU1Q5K131 121 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 TIMM23BQ5SRD1 257 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 LINC01590Q5TEZ4 76 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 ABHD14BQ96IU4 210 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 SNX22Q96L94 193 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 TIMP4Q99727 224 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 FAM206AQ9NX38 181 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 C20orf202A1L168 122 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 CRYM-AS1A6NIL9 109 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 AGFG2O95081 481 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 OR10J4P0C629 311 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 NQO2P16083 231 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 LRRTM1Q86UE6 522 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 OR52B4Q8NGK2 314 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 OR2T6Q8NHC8 308 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 GUCD1Q96NT3 240 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 Q9N2K0 584 aa10.41□□□□□ -0.74
PTPRF-205ENST00000414879 MRPL22Q9NWU5 206 aaKnown RBP10.41□□□□□ -0.74
PTPRF-205ENST00000414879 GAR1Q9NY12 217 aaKnown RBP10.41□□□□□ -0.74
PTPRF-205ENST00000414879 MTCL1Q9Y4B5 1905 aaKnown RBP10.41□□□□□ -0.74
PTPRF-205ENST00000414879 NXPH3O95157 252 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 CTSBP07858 339 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 ERVFRD-1P60508 538 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 FLI1Q01543 452 aaPredicted RBP10.4□□□□□ -0.74
PTPRF-205ENST00000414879 SLC38A11Q08AI6 406 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 TMEM267Q0VDI3 215 aaPredicted RBP10.4□□□□□ -0.74
PTPRF-205ENST00000414879 PJVKQ0ZLH3 352 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 TOR2AQ5JU69 321 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 RFESDQ8TAC1 157 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 PGLYRP3Q96LB9 341 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 MAGT1Q9H0U3 335 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 H7BYZ3 331 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 OR5AC1P0C628 307 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 DAOP14920 347 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 PRDX2P32119 198 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 EGR4Q05215 589 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 ADIRFQ15847 76 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 C11orf91Q3C1V1 193 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 SLC7A5P1Q8MH63 180 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 OR1L6Q8NGR2 347 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 NYNRINQ9P2P1 1898 aaKnown RBP10.4□□□□□ -0.74
PTPRF-205ENST00000414879 C19orf67A6NJJ6 358 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 PCP4L1A6NKN8 68 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 PPP1R2P9O14990 202 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 SSX4O60224 188 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 SLC25A6P12236 298 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 MMP9P14780 707 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 ZNF708P17019 499 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 MAGEB1P43366 347 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 TNFSF10P50591 281 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 H3F3CQ6NXT2 135 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 TGIF2LYQ8IUE0 185 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 TGIF2LXQ8IUE1 241 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 CACNG5Q9UF02 275 aa10.4□□□□□ -0.74
PTPRF-205ENST00000414879 OR7C2O60412 319 aa10.4□□□□□ -0.75
PTPRF-205ENST00000414879 EXOSC2Q13868 293 aaKnown RBP10.4□□□□□ -0.75
PTPRF-205ENST00000414879 MIDNQ504T8 468 aa10.4□□□□□ -0.75
PTPRF-205ENST00000414879 ZNF66Q6ZN08 573 aa10.4□□□□□ -0.75
PTPRF-205ENST00000414879 OR10AD1Q8NGE0 317 aa10.4□□□□□ -0.75
PTPRF-205ENST00000414879 OR10AC1Q8NH08 325 aa10.4□□□□□ -0.75
PTPRF-205ENST00000414879 SAT2Q96F10 170 aaPredicted RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms