RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 TMEM178BH3BS89 294 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 LYRM1O43325 122 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 LANCL1O43813 399 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 VENTXO95231 258 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 PTBP3O95758 552 aaKnown RBP14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 AVPP01185 164 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 CSF1P09603 554 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 BLVRBP30043 206 aaPredicted RBP14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 HILS1P60008 231 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 ESCO2Q56NI9 601 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 DCDC5Q6ZRR9 648 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 WDR86Q86TI4 376 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 C1orf87Q8N0U7 546 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 BPIFB2Q8N4F0 458 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 SCCPDHQ8NBX0 429 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 OR10AD1Q8NGE0 317 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 SLAMF9Q96A28 289 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 SEH1LQ96EE3 360 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 MEGF10Q96KG7 1140 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 MTCH1Q9NZJ7 389 aa14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 POLR3KQ9Y2Y1 108 aaPredicted RBP14.11□□□□□ -0.15
SCAMP4-204ENST00000414057 FBN3Q75N90 2809 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 TMEM235A6NFC5 223 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 H0YL77 283 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 MFNGO00587 321 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 PLA2G10O15496 165 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 SOCS1O15524 211 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 NOS1APO75052 506 aaPredicted RBP14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 BCL3P20749 454 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 PMELP40967 661 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 CBX5P45973 191 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 TMEM50BP56557 158 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 IL13RA2Q14627 380 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 MPV17LQ2QL34 196 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 C12orf54Q6X4T0 127 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 RBFOX1Q9NWB1 397 aaKnown RBP14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 DCAF16Q9NXF7 216 aa14.1□□□□□ -0.15
SCAMP4-204ENST00000414057 ANKRD20A5PA0PJZ0 165 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 MEIOCA2RUB1 952 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 NAP1L6A6NFF2 107 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 SYNGR1O43759 233 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 FSTL3O95633 263 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 PGA5P0DJD9 388 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 IRF2P14316 349 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 GNG2P59768 71 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 MAB21L1Q13394 359 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 KLF9Q13886 244 aaPredicted RBP14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 ZMYND11Q15326 602 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 PLAC9Q5JTB6 97 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 Q6ZNX1 250 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 GCDHQ92947 438 aaPredicted RBP14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 ERGIC1Q969X5 290 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 ARHGAP5-AS1Q96IT6 56 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 NEDD4LQ96PU5 975 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 PECRQ9BY49 303 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 C11orf54Q9H0W9 315 aaPredicted RBP14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 SPACA1Q9HBV2 294 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 KLK11Q9UBX7 282 aa14.09□□□□□ -0.15
SCAMP4-204ENST00000414057 A8MXK9 166 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 F5H5P2 479 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 PTHLHP12272 177 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 GNB3P16520 340 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 GABRR1P24046 479 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 RCVRNP35243 200 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 FAUP35544 74 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 NPBWR2P48146 333 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 ERVK11-1P61568 191 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 TAF9Q16594 264 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 RNASE12Q5GAN4 147 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 FIP1L1Q6UN15 594 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 RBMS3Q6XE24 437 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 FAM58AQ8N1B3 248 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 POC1AQ8NBT0 407 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 FAM216AQ8WUB2 273 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 ST8SIA4Q92187 359 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 PLEKHJ1Q9NW61 149 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 MIOXQ9UGB7 285 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 AUP1Q9Y679 476 aa14.08□□□□□ -0.16
SCAMP4-204ENST00000414057 F5H0A9 414 aaPredicted RBP14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 CDIPTO14735 213 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 GEMIN2O14893 280 aaKnown RBP14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 PDCD6O75340 191 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 GRPP07492 148 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 ZFP36P26651 326 aaKnown RBP14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 CHATP28329 748 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 GATA4P43694 442 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 PIGYQ3MUY2 71 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 SPIN3Q5JUX0 258 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 GDPD3Q7L5L3 318 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 OR11L1Q8NGX0 322 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 OR10Z1Q8NGY1 313 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 ENKURQ8TC29 256 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 NRIP2Q9BQI9 281 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 IFT22Q9H7X7 185 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 ZMAT3Q9HA38 289 aaKnown RBP14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 COPZ2Q9P299 210 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 OPN4Q9UHM6 478 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 TANC2Q9HCD6 1990 aa14.07□□□□□ -0.16
SCAMP4-204ENST00000414057 LINC00854A0A1B0GVQ3 168 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms