RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 SPPL3Q8TCT6 385 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 GNRHR2Q96P88 292 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 MRPL37Q9BZE1 423 aaKnown RBP12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 FOXD3Q9UJU5 478 aaPredicted RBP12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 WDR1O75083 606 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 PMCHP20382 165 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 ERVFRD-1P60508 538 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 DMRTA1Q5VZB9 504 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 OR5AU1Q8NGC0 362 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 CACNG5Q9UF02 275 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 LNP1A1A4G5 178 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 ANKRD30BLA7E2S9 258 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 K7N7A8 449 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 HOXA6P31267 233 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 TCTEX1D1Q8N7M0 179 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 CIB3Q96Q77 187 aaPredicted RBP12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 MSL2Q9HCI7 577 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 MANBALQ9NQG1 85 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 LIN7CQ9NUP9 197 aaKnown RBP12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 OBP2AQ9NY56 170 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 GYPAP02724 150 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 FUT6P51993 359 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 CXorf66Q5JRM2 361 aaPredicted RBP12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 ARL6IP6Q8N6S5 226 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 BEND2Q8NDZ0 799 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 OR1N1Q8NGS0 311 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 OR4X1Q8NH49 305 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 DYRK2Q92630 601 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 RSG1Q9BU20 258 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 ZNF552Q9H707 407 aaPredicted RBP12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 HS3ST3A1Q9Y663 406 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 ZNF814B7Z6K7 855 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 DHHO43323 396 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 CAPZBP47756 277 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 FFAR4Q5NUL3 377 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 CISD2Q8N5K1 135 aaKnown RBP12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 WFIKKN1Q96NZ8 548 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 BET1LQ9NYM9 111 aa12.15□□□□□ -0.46
CLTCL1-201ENST00000412649 OR10G4Q8NGN3 311 aa12.15□□□□□ -0.47
CLTCL1-201ENST00000412649 OR10G9Q8NGN4 311 aa12.15□□□□□ -0.47
CLTCL1-201ENST00000412649 OR10G7Q8NGN6 311 aa12.15□□□□□ -0.47
CLTCL1-201ENST00000412649 OR2AE1Q8NHA4 323 aa12.15□□□□□ -0.47
CLTCL1-201ENST00000412649 PLXND1Q9Y4D7 1925 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 SYNGR2O43760 224 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 LSM6P62312 80 aaKnown RBP12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 CCL20P78556 96 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 MEF2BQ02080 365 aaPredicted RBP12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 FHL1Q13642 323 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 ICAM4Q14773 271 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 ZNF468Q5VIY5 522 aaPredicted RBP12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 GAPTQ8N292 157 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 POC1BQ8TC44 478 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 HS3ST1O14792 307 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 SFTPCP11686 197 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 RHBDD1Q8TEB9 315 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 MARS2Q96GW9 593 aaKnown RBP12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 WFDC1Q9HC57 220 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 FBLN5Q9UBX5 448 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 FCN1O00602 326 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 FKBP2P26885 142 aaKnown RBP12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 CFPP27918 469 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 AAED1Q7RTV5 226 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 OR2V1Q8NHB1 315 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 VWA8A3KMH1 1905 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 MTCL1Q9Y4B5 1905 aaKnown RBP12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 IGSF23A1L1A6 192 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 VAMP5O95183 116 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 SELLP14151 372 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 PNLIPP16233 465 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 SRP14P37108 136 aaKnown RBP12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 SERF2P84101 59 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 CLDND2Q8NHS1 167 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 ABHD14BQ96IU4 210 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 LRRC3BQ96PB8 259 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 ABHD14AQ9BUJ0 271 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 TMEM222Q9H0R3 208 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 PIAS3Q9Y6X2 628 aa12.14□□□□□ -0.47
CLTCL1-201ENST00000412649 URB1O60287 2271 aaKnown RBP12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 BRWD3Q6RI45 1802 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 KRASP01116 189 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 FGF5P12034 268 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 IL11P20809 199 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 GALNSP34059 522 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 ERVK-16P61578 105 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 RDH5Q92781 318 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 ELSPBP1Q96BH3 223 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 MVB12AQ96EY5 273 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 MESP1Q9BRJ9 268 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 KIAA1324LA8MWY0 1029 aaPredicted RBP12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 EDN3P14138 238 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 AMTP48728 403 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 PAFAH1B2P68402 229 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 ATG2BQ96BY7 2078 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 A0A1B0GW64 132 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 A0A1B0GX78 115 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 LIPT2A6NK58 231 aa12.13□□□□□ -0.47
CLTCL1-201ENST00000412649 CA11O75493 328 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms