RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 C6orf132Q5T0Z8 1188 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 GUSBP11Q6P575 273 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 SIAH3Q8IW03 269 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 IKZF4Q9H2S9 585 aa4.08□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM211Q6ICI0 200 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 MRGPREQ86SM8 312 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 OR52N1Q8NH53 320 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 DUX5Q96PT3 197 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 GLIS2Q9BZE0 524 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-202ENST00000411767 WRAP73Q9P2S5 460 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-202ENST00000411767 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-202ENST00000411767 A0A1B0GTH9 108 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 AHRRA9YTQ3 701 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 SFT2D2O95562 160 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM50BP56557 158 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 ERVK11-1P61568 191 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 MESP2Q0VG99 397 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 KIR2DS3Q14952 304 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 YOD1Q5VVQ6 348 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-202ENST00000411767 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.07□□□□□ -1.76
PTPN13-202ENST00000411767 CYB561D1Q8N8Q1 229 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 PRSS16Q9NQE7 514 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 DAPP1Q9UN19 280 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 FUT9Q9Y231 359 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 LOC730098B7Z3J9 87 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 UPK2O00526 184 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 ALOX5APP20292 161 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 LOXL3P58215 753 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 LMAN2Q12907 356 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 PLK5Q496M5 336 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 FAM106AQ4KMX7 169 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 C16orf82Q7Z2V1 217 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 LRTM2Q8N967 370 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 DCAF4L2Q8NA75 395 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 MDGA1Q8NFP4 955 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 SMOC1Q9H4F8 434 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 PLSCR2Q9NRY7 297 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 HDGFL3Q9Y3E1 203 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 HES2Q9Y543 173 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM94Q12767 1356 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 PLIN4Q96Q06 1357 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 M0R1B8 84 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 NDUFB1O75438 58 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 CD22P20273 847 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 CRYBB2P43320 205 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 LPAR6P43657 344 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 UBE2E1P51965 193 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 FMODQ06828 376 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 KIR2DS5Q14953 304 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM88Q6PEY1 159 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 EPGNQ6UW88 154 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 SARAFQ96BY9 339 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 SCNM1Q9BWG6 230 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 FSCN3Q9NQT6 498 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 CLEC1BQ9P126 229 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 ERG28Q9UKR5 140 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 PPIL1Q9Y3C6 166 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 E9PCH4 1651 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 TCRBV16S1A1N1A0A5B0 115 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 SYS1-DBNDD2H3BUS1 97 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 SOD1P00441 154 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 PF4P02776 101 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 IFI27P40305 119 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-202ENST00000411767 SCARF1Q14162 830 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 PRSS42Q7Z5A4 293 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 MUC20Q8N307 709 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-202ENST00000411767 SMIM20Q8N5G0 67 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 NKAPP1Q8N9T2 125 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 OR10D3Q8NH80 312 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 PDXPQ96GD0 296 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 LTB4R2Q9NPC1 389 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 KLHDC2Q9Y2U9 406 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 TRPM1Q7Z4N2 1603 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 FAM90A18PA6NE21 464 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 FAM90A16PA6NEW6 464 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 FAM90A9PA6NNJ1 464 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 FAM90A5PA8MXJ8 464 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 H3BQ85 93 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 PEX7O00628 323 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 C1orf105O95561 183 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 IGHA1P01876 353 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 IGHA2P01877 340 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 ARG1P05089 322 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 FAM90A15PP0C7V4 464 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 FAM90A14PP0C7W9 464 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 CEACAM1P13688 526 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 FUT6P51993 359 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 CX3CL1P78423 397 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 IFITM3Q01628 133 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF124Q15973 351 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF689Q96CS4 500 aaPredicted RBP4.07□□□□□ -1.76
PTPN13-202ENST00000411767 PRNDQ9UKY0 176 aa4.07□□□□□ -1.76
PTPN13-202ENST00000411767 IGKV3D-11A0A0A0MRZ8 115 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 DDTLA6NHG4 134 aaPredicted RBP4.06□□□□□ -1.76
PTPN13-202ENST00000411767 ZBTB42B2RXF5 422 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 CDC42EP2O14613 210 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 IGKV3-11P04433 115 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 PF4V1P10720 104 aa4.06□□□□□ -1.76
PTPN13-202ENST00000411767 TIAL1Q01085 375 aaKnown RBP eCLIP4.06□□□□□ -1.76
PTPN13-202ENST00000411767 ECSCRQ19T08 205 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms