RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 APOBEC3DQ96AK3 386 aaPredicted RBP13.61□□□□□ -0.23
HOXD3-202ENST00000410016 BOD1Q96IK1 185 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 FAM86C1Q9NVL1 165 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 FOXJ2Q9P0K8 574 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 ZNF175Q9Y473 711 aa13.61□□□□□ -0.23
HOXD3-202ENST00000410016 COLCA2A8K830 154 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 ZNF732B4DXR9 585 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 TUSC2O75896 110 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 C1QL1O75973 258 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 TK1P04183 234 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 CRYBA1P05813 215 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 RND3P61587 244 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 SRPXP78539 464 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 MRPL21Q7Z2W9 205 aaKnown RBP13.6□□□□□ -0.23
HOXD3-202ENST00000410016 COMMD1Q8N668 190 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 RXFP4Q8TDU9 374 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 POM121L2Q96KW2 1035 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 TTTY12Q9BZ98 90 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 STRADBQ9C0K7 418 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 ZNF552Q9H707 407 aaPredicted RBP13.6□□□□□ -0.23
HOXD3-202ENST00000410016 IGKV1D-13A0A0B4J2D9 117 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 IGKV1-6A0A0C4DH72 117 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 SLC22A20A6NK97 555 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 JMJD7P0C870 316 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 IGKV1-13P0DP09 117 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 EWSR1Q01844 656 aaKnown RBP eCLIP13.6□□□□□ -0.23
HOXD3-202ENST00000410016 GNMTQ14749 295 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 PEA15Q15121 130 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 TSC22D1Q15714 1073 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 ABHD17BQ5VST6 288 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 ETV3LQ6ZN32 361 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 SELENOHQ8IZQ5 122 aaKnown RBP13.6□□□□□ -0.23
HOXD3-202ENST00000410016 GAPTQ8N292 157 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 GPHA2Q96T91 129 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 LUZP4Q9P127 313 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 B4GALT7Q9UBV7 327 aa13.6□□□□□ -0.23
HOXD3-202ENST00000410016 FAM166BA8MTA8 275 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 ZNF724A8MTY0 619 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 ZNF883P0CG24 379 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 RAB13P51153 203 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 RAB1AP62820 205 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 OR1C1Q15619 314 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 MPV17LQ2QL34 196 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 OR2C3Q8N628 320 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 SYNGR1O43759 233 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 ASCL1P50553 236 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 PPT1P50897 306 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 RAB5CP51148 216 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 ZNF616Q08AN1 781 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 GUK1Q16774 197 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 TMEM251Q8N6I4 163 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 HSD17B11Q8NBQ5 300 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 OR5A2Q8NGI9 324 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 RNF122Q9H9V4 155 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 C19orf12Q9NSK7 152 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 PLA2G3Q9NZ20 509 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 UBE2J1Q9Y385 318 aaPredicted RBP13.59□□□□□ -0.23
HOXD3-202ENST00000410016 KPTNQ9Y664 436 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 ATP23Q9Y6H3 246 aa13.59□□□□□ -0.23
HOXD3-202ENST00000410016 FRYQ5TBA9 3013 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 FAM24AA6NFZ4 105 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 SYNGR4O95473 234 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 SPIN3Q5JUX0 258 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 C20orf204Q6ZNR8 217 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 MKXQ8IYA7 352 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 TNRC6AQ8NDV7 1962 aaKnown RBP13.58□□□□□ -0.24
HOXD3-202ENST00000410016 CLEC18AA5D8T8 446 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 CD300LBA8K4G0 201 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 TRAPPC2LH3BP13 241 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 HSPB6O14558 160 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 LILRA1O75019 489 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 NKX2-1P43699 371 aaPredicted RBP13.58□□□□□ -0.24
HOXD3-202ENST00000410016 CAMLGP49069 296 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 NMSQ5H8A3 153 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 CXorf66Q5JRM2 361 aaPredicted RBP13.58□□□□□ -0.24
HOXD3-202ENST00000410016 DCAF10Q5QP82 559 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 PCSK4Q6UW60 755 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 ZNF695Q8IW36 515 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 CLEC18CQ8NCF0 446 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 APH1AQ96BI3 265 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 GPR87Q9BY21 358 aa13.58□□□□□ -0.24
HOXD3-202ENST00000410016 ZNF407Q9C0G0 2248 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 IGSF23A1L1A6 192 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 PROB1E7EW31 1015 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 UCP1P25874 307 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 PAX6P26367 422 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 ARR3P36575 388 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 HMGN3Q15651 99 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 AVPI1Q5T686 147 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 NUFIP2Q7Z417 695 aaKnown RBP13.57□□□□□ -0.24
HOXD3-202ENST00000410016 SUMF1Q8NBK3 374 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 OR5P3Q8WZ94 311 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 GTF3AQ92664 365 aaKnown RBP13.57□□□□□ -0.24
HOXD3-202ENST00000410016 EGLN1Q9GZT9 426 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 STRAPQ9Y3F4 350 aaKnown RBP13.57□□□□□ -0.24
HOXD3-202ENST00000410016 GPR179Q6PRD1 2367 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 TECTAO75443 2155 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 KIR2DS1A0A191URI9 304 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 K7N7A8 449 aa13.57□□□□□ -0.24
HOXD3-202ENST00000410016 KIR2DS4P43632 304 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms