RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 PHB2Q99623 299 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 MGAT4AQ9UM21 535 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 CELSR2Q9HCU4 2923 aa11.92□□□□□ -0.5
LIMS2-206ENST00000409754 POM121CA8CG34 1229 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 DUS4LO95620 317 aaKnown RBP11.91□□□□□ -0.5
LIMS2-206ENST00000409754 PGAM2P15259 253 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 ZNF44P15621 663 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 HLA-GP17693 338 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 PTAFRP25105 342 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 MDH2P40926 338 aaKnown RBP11.91□□□□□ -0.5
LIMS2-206ENST00000409754 H2BFSP57053 126 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 KLF3P57682 345 aaPredicted RBP11.91□□□□□ -0.5
LIMS2-206ENST00000409754 IFITM2Q01629 132 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 SHEQ5VZ18 495 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 LAMTOR1Q6IAA8 161 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 C11orf88Q6PI97 169 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 TMEM108Q6UXF1 575 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 LRP11Q86VZ4 500 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 C9orf62Q8N4C0 152 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 NUP37Q8NFH4 326 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 OR11H4Q8NGC9 324 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 WDR13Q9H1Z4 485 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 HEATR1Q9H583 2144 aaKnown RBP11.91□□□□□ -0.5
LIMS2-206ENST00000409754 PLSCR3Q9NRY6 295 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 TREM2Q9NZC2 230 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 OPN4Q9UHM6 478 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 DUSP13Q9UII6 198 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 PAIP2BQ9ULR5 123 aaKnown RBP11.91□□□□□ -0.5
LIMS2-206ENST00000409754 C14orf166Q9Y224 244 aaKnown RBP11.91□□□□□ -0.5
LIMS2-206ENST00000409754 BOLA1Q9Y3E2 137 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 CENPEQ02224 2701 aa11.91□□□□□ -0.5
LIMS2-206ENST00000409754 A0A0B4J2A0 478 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 KIR2DS1A0A191URI9 304 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 A6NLC8 198 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 HSPB6O14558 160 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 HS3ST1O14792 307 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 SH2D1BO14796 132 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 RGS11O94810 467 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 SIX6O95475 246 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 SFT2D2O95562 160 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 PTBP3O95758 552 aaKnown RBP11.9□□□□□ -0.5
LIMS2-206ENST00000409754 CTSDP07339 412 aaPredicted RBP11.9□□□□□ -0.5
LIMS2-206ENST00000409754 PPP3CBP16298 524 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 VAMP1P23763 118 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 GLP1RP43220 463 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 KIR2DS4P43632 304 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 BAMBIQ13145 260 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 KIR2DS1Q14954 304 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 PRAMEF6Q5VXH4 476 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 ZNF880Q6PDB4 577 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 WDR82Q6UXN9 313 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 OR5M8Q8NGP6 311 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 MRPL30Q8TCC3 161 aaKnown RBP11.9□□□□□ -0.5
LIMS2-206ENST00000409754 RDH5Q92781 318 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 LIME1Q9H400 295 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 SHPKQ9UHJ6 478 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 FBN2P35556 2912 aa11.9□□□□□ -0.5
LIMS2-206ENST00000409754 HRNRQ86YZ3 2850 aaPredicted RBP11.9□□□□□ -0.5
LIMS2-206ENST00000409754 NBPF19A0A087WUL8 3843 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 IGHV3-64DA0A0J9YX35 117 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 C3orf80F5H4A9 247 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 SLC33A1O00400 549 aaPredicted RBP11.89□□□□□ -0.51
LIMS2-206ENST00000409754 RGS13O14921 159 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 CLDN1O95832 211 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 OR2H2O95918 312 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 THBDP07204 575 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 GLRA1P23415 457 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 SELENOVP59797 346 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 SRSF4Q08170 494 aaKnown RBP11.89□□□□□ -0.51
LIMS2-206ENST00000409754 PAN3Q58A45 887 aaKnown RBP11.89□□□□□ -0.51
LIMS2-206ENST00000409754 LY6G6FQ5SQ64 297 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 DCAF12L2Q5VW00 463 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 ZNF826PQ6ZT77 177 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 WFDC8Q8IUA0 241 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 OR2Z1Q8NG97 314 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 TMEM246Q9BRR3 403 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 CLEC4MQ9H2X3 399 aaPredicted RBP11.89□□□□□ -0.51
LIMS2-206ENST00000409754 SLC23A1Q9UHI7 598 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 GLS2Q9UI32 602 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 HSPB11Q9Y547 144 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 ATP23Q9Y6H3 246 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 PLSCR5A0PG75 271 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 ZSCAN5BA6NJL1 495 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 TRDCB7Z8K6 153 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 H7C1Q1 480 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 CTXN2P0C2S0 81 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 PI3P19957 117 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 FCGR2CP31995 323 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 UCP3P55916 312 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 TFF3Q07654 80 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 Q5BKY6 102 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 LIN54Q6MZP7 749 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 VHLLQ6RSH7 139 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 CASTOR1Q8WTX7 329 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 MOB3AQ96BX8 217 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 SYT3Q9BQG1 590 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 TMPRSS13Q9BYE2 586 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 FXYD6Q9H0Q3 95 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 SLA2Q9H6Q3 261 aa11.89□□□□□ -0.51
LIMS2-206ENST00000409754 DBX1A6NMT0 343 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms