RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 SPTBN1Q01082 2364 aaKnown RBP11.28□□□□□ -0.6
PTPRN-202ENST00000409251 NKX2-6A6NCS4 301 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 FRG2CA6NGY1 282 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 DBHP09172 617 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 OR4A8P0C604 315 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 CCNOP22674 350 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 NKX2-1P43699 371 aaPredicted RBP11.28□□□□□ -0.6
PTPRN-202ENST00000409251 P2RY1P47900 373 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 HLA-DRB3P79483 266 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 SGCBQ16585 318 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 C1orf100Q5SVJ3 147 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 DHRS13Q6UX07 377 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 OR51H1Q8NH63 302 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 GALNT14Q96FL9 552 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 CALHM2Q9HA72 323 aa11.28□□□□□ -0.6
PTPRN-202ENST00000409251 A0A1W2PNV4 684 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 TGOLN2O43493 480 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 IAPPP10997 89 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 TCN2P20062 427 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 HSF1Q00613 529 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 EMC4Q5J8M3 183 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 DMRTA1Q5VZB9 504 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 BTNL3Q6UXE8 466 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 SLC43A2Q8N370 569 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 DTD1Q8TEA8 209 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 HOXB13Q92826 284 aaPredicted RBP11.27□□□□□ -0.6
PTPRN-202ENST00000409251 TMEM68Q96MH6 324 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 GPX7Q96SL4 187 aaPredicted RBP11.27□□□□□ -0.6
PTPRN-202ENST00000409251 RBM24Q9BX46 236 aaKnown RBP11.27□□□□□ -0.6
PTPRN-202ENST00000409251 UCK1Q9HA47 277 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 PLEKHA2Q9HB19 425 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 PATZ1Q9HBE1 687 aaKnown RBP11.27□□□□□ -0.6
PTPRN-202ENST00000409251 SRPK3Q9UPE1 567 aa11.27□□□□□ -0.6
PTPRN-202ENST00000409251 DUSP1P28562 367 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 DYNLT3P51808 116 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 OR2C3Q8N628 320 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 AGBL5Q8NDL9 886 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 SLC25A31Q9H0C2 315 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 PIGLQ9Y2B2 252 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 ZNF816-ZNF321PA0A0X1KG74 233 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 LNP1A1A4G5 178 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 HSD17B6O14756 317 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 FOXF1Q12946 379 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 SLC10A1Q14973 349 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 TWSG1Q9GZX9 223 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 DCAF16Q9NXF7 216 aa11.27□□□□□ -0.61
PTPRN-202ENST00000409251 IGHV3-64DA0A0J9YX35 117 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 PPP5D1E7EU14 171 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 LDLRAD4O15165 306 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 GSTP1P09211 210 aaKnown RBP11.26□□□□□ -0.61
PTPRN-202ENST00000409251 CARD18P57730 90 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 SRSF4Q08170 494 aaKnown RBP11.26□□□□□ -0.61
PTPRN-202ENST00000409251 PRSS8Q16651 343 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 SDSLQ96GA7 329 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 HIST1H2AAQ96QV6 131 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 OR5B12Q96R08 314 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 PECRQ9BY49 303 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 PCED1AQ9H1Q7 454 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 FOXD3Q9UJU5 478 aaPredicted RBP11.26□□□□□ -0.61
PTPRN-202ENST00000409251 PAM16Q9Y3D7 125 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 GTF3C1Q12789 2109 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 PLPP3O14495 311 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 DFFBO76075 338 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 SEC11BP0C7V7 166 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 CHRNA7P36544 502 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 SMIM7Q9BQ49 75 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 POMT1Q9Y6A1 747 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 EML6Q6ZMW3 1958 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 LOC102724200A0A096LPH7 203 aaPredicted RBP11.26□□□□□ -0.61
PTPRN-202ENST00000409251 FIGNL2A6NMB9 653 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 CLDN34H7C241 214 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 M0R296 226 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 MSTNO14793 375 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 TCF21O43680 179 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 S100A7P31151 101 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTPRN-202ENST00000409251 SLC2A9Q9NRM0 540 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 PPIAL4AQ9Y536 164 aa11.26□□□□□ -0.61
PTPRN-202ENST00000409251 TMEM127O75204 238 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 RBMXL2O75526 392 aaKnown RBP11.25□□□□□ -0.61
PTPRN-202ENST00000409251 PATE4P0C8F1 98 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 CLDN17P56750 224 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 GABREP78334 506 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 COL10A1Q03692 680 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 TNFRSF9Q07011 255 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 OR5I1Q13606 314 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 CALHM1Q8IU99 346 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 KDF1Q8NAX2 398 aaPredicted RBP11.25□□□□□ -0.61
PTPRN-202ENST00000409251 IL1F10Q8WWZ1 152 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 PCGF1Q9BSM1 259 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 PLEK2Q9NYT0 353 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 ADAM20O43506 726 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 NPSP0C0P6 89 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 EGR1P18146 543 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 TBPP20226 339 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 THBS4P35443 961 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 POLR2HP52434 150 aaKnown RBP11.25□□□□□ -0.61
PTPRN-202ENST00000409251 PAX5Q02548 391 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 ROM1Q03395 351 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 GPR137CQ8N3F9 429 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms