RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 IL3RAP26951 378 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 OPRM1P35372 400 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 ARF3P61204 181 aaPredicted RBP11.09□□□□□ -0.63
HERC3-203ENST00000407637 TMEM41BQ5BJD5 291 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 SLC25A24Q6NUK1 477 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 UNQ5815/PRO19632Q6UWF5 114 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 WDFY1Q8IWB7 410 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 ZNF709Q8N972 641 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 SLC38A9Q8NBW4 561 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 ADAMTS9Q9P2N4 1935 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 CTSBP07858 339 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 TCN2P20062 427 aa11.09□□□□□ -0.63
HERC3-203ENST00000407637 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
HERC3-203ENST00000407637 TRAV39A0A0B4J263 110 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 A0A1W2PNV4 684 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 OR2J2O76002 312 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 EML2O95834 649 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 TOMM40O96008 361 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 COMPP49747 757 aaPredicted RBP11.08□□□□□ -0.64
HERC3-203ENST00000407637 SEC13P55735 322 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 Q8NFD4 153 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 OR2V1Q8NHB1 315 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 PLPPR1Q8TBJ4 325 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 AGMATQ9BSE5 352 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 TIMM29Q9BSF4 260 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 PATZ1Q9HBE1 687 aaKnown RBP11.08□□□□□ -0.64
HERC3-203ENST00000407637 C5orf42Q9H799 3197 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 IGKV1-9A0A0C4DH69 117 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 IFI6P09912 130 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 PVRP15151 417 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 MLF1P58340 268 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 FAM78BQ5VT40 261 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 OR5T1Q8NG75 326 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 OR4C5Q8NGB2 326 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 OR10G6Q8NH81 332 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 KIR3DX1Q9H7L2 352 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 PLEKHJ1Q9NW61 149 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 LAMTOR2Q9Y2Q5 125 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 GON4LQ3T8J9 2241 aa11.08□□□□□ -0.64
HERC3-203ENST00000407637 MKI67P46013 3256 aaKnown RBP11.08□□□□□ -0.64
HERC3-203ENST00000407637 TRAV34A0A0B4J273 112 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 H3BP45 60 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 HOXA2O43364 376 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 SEMA4FO95754 770 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 TPPP2P59282 170 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 FIGLAQ6QHK4 219 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 MRGPRGQ86SM5 289 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 FLVCR1-AS1Q8TAF5 88 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 RERGQ96A58 199 aaPredicted RBP11.07□□□□□ -0.64
HERC3-203ENST00000407637 PGAM5Q96HS1 289 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 RTN4RQ9BZR6 473 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 NECAP2Q9NVZ3 263 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 HCFC2Q9Y5Z7 792 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 A0A0U1RQK1 487 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 ZNF320A2RRD8 509 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 GPR89AB7ZAQ6 455 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 PRRT4C9JH25 899 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 GPR89BP0CG08 455 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 ZNF17P17021 662 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 IL11P20809 199 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 SRP14P37108 136 aaKnown RBP11.07□□□□□ -0.64
HERC3-203ENST00000407637 SLC6A8P48029 635 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 ELAVL3Q14576 367 aaKnown RBP11.07□□□□□ -0.64
HERC3-203ENST00000407637 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.07□□□□□ -0.64
HERC3-203ENST00000407637 SFTPA1Q8IWL2 248 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 CRIPAKQ8N1N5 446 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 SLC24A4Q8NFF2 622 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 IFI44Q8TCB0 444 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 SPPL3Q8TCT6 385 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 PARLQ9H300 379 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 FBRSQ9HAH7 460 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 ZNF160Q9HCG1 818 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 TP53TG3Q9ULZ0 132 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 COX11Q9Y6N1 276 aa11.07□□□□□ -0.64
HERC3-203ENST00000407637 TMEM238C9JI98 176 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 CCL16O15467 120 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 ZNF737O75373 536 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 NUDT14O95848 222 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 ADMP35318 185 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 LINC00310P59036 64 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 BAXQ07812 192 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 HNRNPA1L2Q32P51 320 aaKnown RBP11.06□□□□□ -0.64
HERC3-203ENST00000407637 FBLN7Q53RD9 439 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 TCF23Q7RTU1 214 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 LINC01551Q86U37 167 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 D2HGDHQ8N465 521 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 OR8B12Q8NGG6 310 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 FAM3CQ92520 227 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 DYRK2Q92630 601 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 APH1AQ96BI3 265 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 TXN2Q99757 166 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 WWTR1Q9GZV5 400 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 RPH3ALQ9UNE2 315 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 RNF114Q9Y508 228 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 PXMP4Q9Y6I8 212 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 NOTCH4Q99466 2003 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 TNFRSF10CO14798 259 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 ADAM20O43506 726 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 IFNA1P01562 189 aa11.06□□□□□ -0.64
HERC3-203ENST00000407637 GYPAP02724 150 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms