RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ELP2Q6IA86 826 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 EIF5AL1Q6IS14 154 aaKnown RBP11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 RGS7BPQ6MZT1 257 aaPredicted RBP11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 DHRS11Q6UWP2 260 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 C6orf201Q7Z4U5 140 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 HSD17B13Q7Z5P4 300 aaPredicted RBP11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 ZDHHC23Q8IYP9 409 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 FAM185AQ8N0U4 392 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 CCDC71LQ8N9Z2 235 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 Q8NFD4 153 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 OR5A2Q8NGI9 324 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 GMPPAQ96IJ6 420 aaPredicted RBP11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 SEC22AQ96IW7 307 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF2Q9BSG1 426 aaPredicted RBP11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 RTBDNQ9BSG5 229 aaPredicted RBP11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 RIMS4Q9H426 269 aaPredicted RBP11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 SPACA1Q9HBV2 294 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 DECR2Q9NUI1 292 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 GLS2Q9UI32 602 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 ST3GAL6Q9Y274 331 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 MPC1Q9Y5U8 109 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 MED12LQ86YW9 2145 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 A0A0G2JNJ9 132 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 TEX13DA0A0J9YY54 714 aaPredicted RBP11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 ANKRD30BLA7E2S9 258 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 NUDT19A8MXV4 375 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 SPRY1O43609 319 aaPredicted RBP11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 GLAP06280 429 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 HEXAP06865 529 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 CTXN2P0C2S0 81 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 PATE4P0C8F1 98 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 OR5H8P0DN80 308 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 CD79AP11912 226 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 LYL1P12980 280 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 TPT1P13693 172 aaKnown RBP11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 RBM11P57052 281 aaKnown RBP11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 RAB1AP62820 205 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 TGFBR3Q03167 851 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 FOXF2Q12947 444 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 TAF9Q16594 264 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 MPV17LQ2QL34 196 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 DEFB113Q30KQ7 82 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 CEACAM21Q3KPI0 293 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 ABCA11PQ4W5N1 156 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 TOR2AQ5JU69 321 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 AADACL3Q5VUY0 350 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF660Q6AZW8 331 aaPredicted RBP11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 PRSS54Q6PEW0 395 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 EIF4E3Q8N5X7 224 aaKnown RBP11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 NAXEQ8NCW5 288 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 DOCK7Q96N67 2140 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF471Q9BX82 626 aaPredicted RBP11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 SUCNR1Q9BXA5 334 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 Q9UFV3 132 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 AK3Q9UIJ7 227 aa11.04□□□□□ -0.64
SMARCB1-203ENST00000407082 C5orf49A4QMS7 147 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 OR5B21A6NL26 309 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 F5H0A9 414 aaPredicted RBP11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 TRAPPC2LH3BP13 241 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 SDCBPO00560 298 aaPredicted RBP11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 CCSO14618 274 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 ANGPTL7O43827 346 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 FCGR3AP08637 254 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF728P0DKX0 622 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 SRPXP78539 464 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 HGFACQ04756 655 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 SLC9A3R2Q15599 337 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 FBXW9Q5XUX1 488 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 ALKAL2Q6UX46 152 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 Q6ZS49 121 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 FAM214BQ7L5A3 538 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF573Q86YE8 665 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 SLC38A6Q8IZM9 456 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 FBXL14Q8N1E6 418 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 CNEP1R1Q8N9A8 125 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 CPEB3Q8NE35 698 aaKnown RBP11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 FGFBP3Q8TAT2 258 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 DCUN1D4Q92564 292 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 FAAP24Q9BTP7 215 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 PAPOLGQ9BWT3 736 aaKnown RBP11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF442Q9H7R0 627 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 C12orf4Q9NQ89 552 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 SDHAF2Q9NX18 166 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 CRIM1Q9NZV1 1036 aa11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF629Q9UEG4 869 aaPredicted RBP11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 FBXO9Q9UK97 447 aaPredicted RBP11.03□□□□□ -0.64
SMARCB1-203ENST00000407082 STAB1Q9NY15 2570 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 IGKV1-27A0A075B6S5 117 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 PQLC2LA1A4F0 135 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 CRYM-AS1A6NIL9 109 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 SS18L1O75177 396 aaPredicted RBP11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 SPDEFO95238 335 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 DIRAS3O95661 229 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 CRYZL1O95825 349 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 NMBP08949 121 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 ZP3P21754 424 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 BMP5P22003 454 aa11.02□□□□□ -0.65
SMARCB1-203ENST00000407082 CCNOP22674 350 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms