RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	ANGPTL6	Q8NI99	470 aa		11.66	□□□□□ -0.54
CACNA1C-222	ENST00000406454	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.66	□□□□□ -0.54
CACNA1C-222	ENST00000406454	T	O15178	435 aa		11.66	□□□□□ -0.54
CACNA1C-222	ENST00000406454	INPP5J	Q15735	1006 aa	Predicted RBP	11.66	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CCL28	Q9NRJ3	127 aa		11.66	□□□□□ -0.54
CACNA1C-222	ENST00000406454	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.66	□□□□□ -0.54
CACNA1C-222	ENST00000406454	IL11	P20809	199 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	SLC25A40	Q8TBP6	338 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	GPX7	Q96SL4	187 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	LANCL1	O43813	399 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	MGAT2	Q10469	447 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ACSM6	Q6P461	480 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	RAB1C	Q92928	201 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	MRPL24	Q96A35	216 aa	Known RBP	11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	R3HDM4	Q96D70	268 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	OPN4	Q9UHM6	478 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	TNS1	Q9HBL0	1735 aa	Known RBP	11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	IGHV1-45	A0A0A0MS14	117 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	PIGY	Q3MUY2	71 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	NXF2	Q9GZY0	626 aa	Known RBP	11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	LY75	O60449	1722 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	FOCAD	Q5VW36	1801 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454		A0A1W2PN81	502 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ZNF785	A8K8V0	405 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	VDAC1	P21796	283 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	CHRNA7	P36544	502 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	OR11H7	Q8NGC8	314 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	OR10G4	Q8NGN3	311 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	OR10G9	Q8NGN4	311 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	OR10G7	Q8NGN6	311 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	ANGPTL4	Q9BY76	406 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	SLC35B3	Q9H1N7	401 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	RNF7	Q9UBF6	113 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	MED19	A0JLT2	244 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	SOX15	O60248	233 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	UPK3A	O75631	287 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	SPP1	P10451	314 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	FAM27B	Q5VT28	67 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	SLC25A45	Q8N413	288 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	RND1	Q92730	232 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	PTX4	Q96A99	478 aa		11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	COLQ	Q9Y215	455 aa	Predicted RBP	11.65	□□□□□ -0.54
CACNA1C-222	ENST00000406454	WFDC6	Q9BQY6	131 aa		11.65	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RAB1B	Q9H0U4	201 aa		11.65	□□□□□ -0.55
CACNA1C-222	ENST00000406454	CELA2A	P08217	269 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	S100A4	P26447	101 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	AAMDC	Q9H7C9	122 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RPL36A-HNRNPH2	H7BZ11	118 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	GZMH	P20718	246 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	CEACAM3	P40198	252 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RHOB	P62745	196 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OR4F17	Q8NGA8	305 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454		A0A1W2PPC1	479 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	CLDN34	H7C241	214 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TMEM241	Q24JQ0	296 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	CA10	Q9NS85	328 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ZNF205	O95201	554 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	HLA-DRB3	P79483	266 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	MDP1	Q86V88	176 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	MYPOP	Q86VE0	399 aa	Predicted RBP	11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SLC25A22	Q9H936	323 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ZNF737	O75373	536 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	CA11	O75493	328 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	NUP37	Q8NFH4	326 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SLC2A9	Q9NRM0	540 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	MRPS18B	Q9Y676	258 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RGPD4	Q7Z3J3	1758 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SMIM10L1	P0DMW3	83 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	HOGA1	Q86XE5	327 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	VSTM2A	Q8TAG5	236 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	DPH3	Q96FX2	82 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SMIM10	Q96HG1	83 aa		11.64	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OPN1MW	P04001	364 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ANKRD34C	P0C6C1	535 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OPN1MW2	P0DN77	364 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	OPN1MW3	P0DN78	364 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	FST	P19883	344 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ZXDC	Q2QGD7	858 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TIPARP	Q7Z3E1	657 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	C9orf62	Q8N4C0	152 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TMEM210	A6NLX4	147 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	DYNLT3	P51808	116 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	STARD6	P59095	220 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	KCNE5	Q9UJ90	142 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	DSPP	Q9NZW4	1301 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	TMPRSS2	O15393	492 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	FGF5	P12034	268 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	FNDC7	Q5VTL7	733 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	BCL2L2	Q92843	193 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SCMH1	Q96GD3	660 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	PPP1R3E	Q9H7J1	279 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	CHST1	O43916	411 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RNF212	Q495C1	297 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	DHRS11	Q6UWP2	260 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	LINC00596	Q86U02	117 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SEBOX	Q9HB31	216 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	RGS13	O14921	159 aa		11.63	□□□□□ -0.55
CACNA1C-222	ENST00000406454	SLC25A5	P05141	298 aa	Known RBP	11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms