RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 RBM39Q14498 530 aaKnown RBP27.56■■■□□ 2
CSNK1E-204ENST00000403904 OR4M1Q8NGD0 313 aa27.56■■■□□ 2
CSNK1E-204ENST00000403904 PLPPR1Q8TBJ4 325 aa27.56■■■□□ 2
CSNK1E-204ENST00000403904 DYRK2Q92630 601 aa27.56■■■□□ 2
CSNK1E-204ENST00000403904 HSF4Q9ULV5 492 aa27.56■■■□□ 2
CSNK1E-204ENST00000403904 SCGNO76038 276 aa27.56■■■□□ 2
CSNK1E-204ENST00000403904 CSN2P05814 226 aa27.56■■■□□ 2
CSNK1E-204ENST00000403904 SPNS3Q6ZMD2 512 aa27.56■■■□□ 2
CSNK1E-204ENST00000403904 COQ2Q96H96 371 aa27.56■■■□□ 2
CSNK1E-204ENST00000403904 MMP27Q9H306 513 aa27.56■■■□□ 2
CSNK1E-204ENST00000403904 DIABLOQ9NR28 239 aa27.56■■■□□ 2
CSNK1E-204ENST00000403904 A8MXK9 166 aa27.55■■■□□ 2
CSNK1E-204ENST00000403904 FAM25AB3EWG3 89 aa27.55■■■□□ 2
CSNK1E-204ENST00000403904 FAM25CB3EWG5 89 aa27.55■■■□□ 2
CSNK1E-204ENST00000403904 FAM25GB3EWG6 89 aa27.55■■■□□ 2
CSNK1E-204ENST00000403904 GPR37O15354 613 aa27.55■■■□□ 2
CSNK1E-204ENST00000403904 GLAP06280 429 aa27.55■■■□□ 2
CSNK1E-204ENST00000403904 GNB3P16520 340 aa27.55■■■□□ 2
CSNK1E-204ENST00000403904 OLFML2AQ68BL7 652 aa27.55■■■□□ 2
CSNK1E-204ENST00000403904 IZUMO1Q8IYV9 350 aa27.55■■■□□ 2
CSNK1E-204ENST00000403904 KCNK7Q9Y2U2 307 aa27.55■■■□□ 2
CSNK1E-204ENST00000403904 FOXH1O75593 365 aa27.54■■■□□ 2
CSNK1E-204ENST00000403904 KCNJ3P48549 501 aa27.54■■■□□ 2
CSNK1E-204ENST00000403904 KRBOX4Q5JUW0 171 aa27.54■■■□□ 2
CSNK1E-204ENST00000403904 C1orf159Q96HA4 380 aa27.54■■■□□ 2
CSNK1E-204ENST00000403904 ETAA1Q9NY74 926 aa27.54■■■□□ 2
CSNK1E-204ENST00000403904 A3GALT2U3KPV4 340 aa27.54■■■□□ 2
CSNK1E-204ENST00000403904 DSCAML1Q8TD84 2053 aa27.54■■■□□ 2
CSNK1E-204ENST00000403904 LOC105371242A0A075B767 164 aa27.53■■■□□ 2
CSNK1E-204ENST00000403904 C22orf46C9J442 243 aa27.53■■■□□ 2
CSNK1E-204ENST00000403904 HIST1H1DP16402 221 aaKnown RBP27.53■■■□□ 2
CSNK1E-204ENST00000403904 GLIPR1P48060 266 aa27.53■■■□□ 2
CSNK1E-204ENST00000403904 COX4I2Q96KJ9 171 aa27.53■■■□□ 2
CSNK1E-204ENST00000403904 DCTN5Q9BTE1 182 aa27.53■■■□□ 2
CSNK1E-204ENST00000403904 TRAV18A0A075B6X5 111 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 A0A0A6YYH2 397 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 A6NJ64 397 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 IGHV4-31P0DP07 118 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 RSBN1Q5VWQ0 802 aaPredicted RBP27.52■■■□□ 2
CSNK1E-204ENST00000403904 C19orf12Q9NSK7 152 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 KIAA2026Q5HYC2 2103 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 ACANP16112 2415 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 MEX3AA1L020 520 aaKnown RBP27.52■■■□□ 2
CSNK1E-204ENST00000403904 B4DSR2 109 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 XRCC3O43542 346 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 P2RX3P56373 397 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 RPL31P62899 125 aaKnown RBP27.52■■■□□ 2
CSNK1E-204ENST00000403904 MADCAM1Q13477 382 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 CDNFQ49AH0 187 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 CD276Q5ZPR3 534 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 MSI2Q96DH6 328 aaKnown RBP27.52■■■□□ 2
CSNK1E-204ENST00000403904 NUDT16L1Q9BRJ7 211 aaKnown RBP27.52■■■□□ 2
CSNK1E-204ENST00000403904 AK3Q9UIJ7 227 aa27.52■■■□□ 2
CSNK1E-204ENST00000403904 RPUSD1Q9UJJ7 312 aaKnown RBP27.52■■■□□ 2
CSNK1E-204ENST00000403904 ELF5Q9UKW6 265 aaPredicted RBP27.52■■■□□ 2
CSNK1E-204ENST00000403904 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP27.51■■□□□ 1.995e-7■■□□□ 14.3
CSNK1E-204ENST00000403904 MFNGO00587 321 aa27.51■■□□□ 1.99
CSNK1E-204ENST00000403904 ECDO95905 644 aaPredicted RBP27.51■■□□□ 1.99
CSNK1E-204ENST00000403904 ERP29P30040 261 aaKnown RBP27.51■■□□□ 1.99
CSNK1E-204ENST00000403904 LINC01356Q8N9X3 169 aa27.51■■□□□ 1.99
CSNK1E-204ENST00000403904 MMP26Q9NRE1 261 aa27.51■■□□□ 1.99
CSNK1E-204ENST00000403904 KIF25Q9UIL4 384 aa27.51■■□□□ 1.99
CSNK1E-204ENST00000403904 MSMBP08118 114 aa27.5■■□□□ 1.99
CSNK1E-204ENST00000403904 TMEM69Q5SWH9 247 aa27.5■■□□□ 1.99
CSNK1E-204ENST00000403904 ZNF497Q6ZNH5 498 aa27.5■■□□□ 1.99
CSNK1E-204ENST00000403904 EXTL2Q9UBQ6 330 aa27.5■■□□□ 1.99
CSNK1E-204ENST00000403904 ADAM30Q9UKF2 790 aa27.5■■□□□ 1.99
CSNK1E-204ENST00000403904 POLR3KQ9Y2Y1 108 aaPredicted RBP27.5■■□□□ 1.99
CSNK1E-204ENST00000403904 WNK2Q9Y3S1 2297 aa27.5■■□□□ 1.99
CSNK1E-204ENST00000403904 GZMKP49863 264 aa27.49■■□□□ 1.99
CSNK1E-204ENST00000403904 PAX5Q02548 391 aa27.49■■□□□ 1.99
CSNK1E-204ENST00000403904 ZNF260Q3ZCT1 412 aa27.49■■□□□ 1.99
CSNK1E-204ENST00000403904 SLC35E4Q6ICL7 350 aa27.49■■□□□ 1.99
CSNK1E-204ENST00000403904 ABCA1O95477 2261 aa27.49■■□□□ 1.99
CSNK1E-204ENST00000403904 MEIKINA0A087WXM9 373 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 TRBV23-1A0A0A0MS06 115 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 FUOMA2VDF0 154 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 PAX2Q02962 417 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 C11orf91Q3C1V1 193 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 CNIH2Q6PI25 160 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 FAM185AQ8N0U4 392 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 HDHD3Q9BSH5 251 aaPredicted RBP27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 TMEM30CPA0ZSE6 113 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 ODAMA1E959 279 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 TMEM235A6NFC5 223 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 TAS2R20P59543 309 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 TMEM200BQ69YZ2 307 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 DIRAS2Q96HU8 199 aa27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 MRPS7Q9Y2R9 242 aaKnown RBP27.48■■□□□ 1.99
CSNK1E-204ENST00000403904 TRAV39A0A0B4J263 110 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 PPIAL4CA0A0B4J2A2 164 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 A0A1W2PQ09 198 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 CLPXO76031 633 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 MT-ND4P03905 459 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 PPIAL4GP0DN37 164 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 PTHLHP12272 177 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 TNFSF8P32971 234 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 ARL6IP1Q15041 203 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 LY6G5BQ8NDX9 201 aa27.47■■□□□ 1.99
CSNK1E-204ENST00000403904 OR4K15Q8NH41 348 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms