RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MAGEB3O15480 346 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 CHST1O43916 411 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 CLPXO76031 633 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 HTR3BO95264 441 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 CD2P06729 351 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 CDK2P24941 298 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 MTNR1BP49286 362 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 AQP4P55087 323 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 PROK1P58294 105 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 RPS11P62280 158 aaKnown RBP eCLIP4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 INSL4Q14641 139 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 FAM189A2Q15884 450 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 SSX2Q16385 188 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 PIGYQ3MUY2 71 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 CCDC58Q4VC31 144 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 PAN3Q58A45 887 aaKnown RBP4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 KRBOX4Q5JUW0 171 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 DDI2Q5TDH0 399 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 ZNF626Q68DY1 528 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 DMKNQ6E0U4 476 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 SLC35E4Q6ICL7 350 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 TMEM219Q86XT9 240 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 STX19Q8N4C7 294 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR11H6Q8NGC7 330 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR13D1Q8NGV5 346 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR52N1Q8NH53 320 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR5R1Q8NH85 324 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 SGMS2Q8NHU3 365 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 PLPPR1Q8TBJ4 325 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 PIFOQ8TCI5 191 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 HAVCR2Q8TDQ0 301 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 SGCDQ92629 289 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 TFAP2CQ92754 450 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 SMIM19Q96E16 107 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 CYYR1Q96J86 154 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 PGLYRP3Q96LB9 341 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 OR14A2Q96R54 314 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 MEGF9Q9H1U4 602 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 CHCHD3Q9NX63 227 aaKnown RBP4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 PSORS1C1Q9UIG5 152 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 KIF25Q9UIL4 384 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 ING4Q9UNL4 249 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 PCDHGB5Q9Y5G0 923 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 HILPDAQ9Y5L2 63 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 SESN1Q9Y6P5 492 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 HSPE1-MOB4S4R3N1 261 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 TGP01266 2768 aa4.66□□□□□ -1.66
HMGB1P20-201ENST00000402555 TRBV5-7A0A0A0MS05 114 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 A0A1W2PP11 408 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 PTGES3LE9PB15 166 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 MYL12BO14950 172 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 PIN1P1O15428 100 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 TSPAN9O75954 239 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 IGHV3-7P01780 117 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 RBP4P02753 201 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 IGFBP3P17936 291 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 CELP19835 753 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 SERPINA2P20848 420 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 LMO1P25800 156 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 ERP29P30040 261 aaKnown RBP4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 BDKRB2P30411 391 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 GABRA5P31644 462 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 ZNF93P35789 620 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 TGFBR2P37173 567 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 PTGFRP43088 359 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 GLP1RP43220 463 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 WNT4P56705 351 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 RPL15P61313 204 aaKnown RBP4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 PPP3R1P63098 170 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 SLC34A1Q06495 639 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 MED21Q13503 144 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 RIPK1Q13546 671 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 RSU1Q15404 277 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 LTC4SQ16873 150 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 C17orf58Q2M2W7 97 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 Q499Y3 187 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 SLC22A6Q4U2R8 563 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 FBLN7Q53RD9 439 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 PRR31Q5SQ13 230 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 ELP2Q6IA86 826 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 CCBE1Q6UXH8 406 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 ASCL4Q6XD76 172 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 C11orf44Q8N8P7 122 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 CHST4Q8NCG5 386 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 PXT1Q8NFP0 134 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 OR4P4Q8NGL7 312 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 OR13A1Q8NGR1 328 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 NDNFQ8TB73 568 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 ZNF184Q99676 751 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 CITED1Q99966 193 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 CLEC7AQ9BXN2 247 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 TMEM133Q9H2Q1 129 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 VCXQ9H320 206 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 C16orf95Q9H693 158 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 ZNF696Q9H7X3 374 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 DCLRE1BQ9H816 532 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 ZNF286AQ9HBT8 521 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 TMEM138Q9NPI0 162 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 PLCXD1Q9NUJ7 323 aa4.65□□□□□ -1.67
HMGB1P20-201ENST00000402555 FKBP14Q9NWM8 211 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms