RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SLC35B1P78383 322 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 MS4A10Q96PG2 267 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 ZNF275Q9NSD4 429 aaPredicted RBP12.1□□□□□ -0.47
VAPA-202ENST00000400000 HSF4Q9ULV5 492 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 SFT2D2O95562 160 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 PLAUP00749 431 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 ZAR1Q86SH2 424 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 ADAD2Q8NCV1 583 aaKnown RBP12.1□□□□□ -0.47
VAPA-202ENST00000400000 MRGPRFQ96AM1 343 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 HARBI1Q96MB7 349 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 FKBP11Q9NYL4 201 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 B2MP61769 119 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 TMEM241Q24JQ0 296 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 OR2D3Q8NGH3 330 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 OR6C3Q9NZP0 311 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 CLN8Q9UBY8 286 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 EIF3GO75821 320 aaKnown RBP eCLIP12.1□□□□□ -0.47
VAPA-202ENST00000400000 MOGAT2Q3SYC2 334 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 CCL13Q99616 98 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 OR2J1Q9GZK6 312 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 SH2D2AQ9NP31 389 aa12.1□□□□□ -0.47
VAPA-202ENST00000400000 CHST1O43916 411 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 FTH1P19P0C7X4 201 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 MESTQ5EB52 335 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 VN1R4Q7Z5H5 301 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 ASB13Q8WXK3 278 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 NUP214P35658 2090 aaPredicted RBP12.09□□□□□ -0.47
VAPA-202ENST00000400000 SMIM4Q8WVI0 70 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 ISOC2Q96AB3 205 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 FAM181BA6NEQ2 426 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 TEX261Q6UWH6 196 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 LIAT1Q6ZQX7 453 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 OR1L6Q8NGR2 347 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 SLC45A2Q9UMX9 530 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 PDCD6O75340 191 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 PEX11BO96011 259 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 PTBP1P26599 531 aaKnown RBP eCLIP12.09□□□□□ -0.473e-7■■■□□ 15.2
VAPA-202ENST00000400000 LRRC75AQ8NAA5 344 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 TMEM174Q8WUU8 243 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 SLC25A10Q9UBX3 287 aaPredicted RBP12.09□□□□□ -0.47
VAPA-202ENST00000400000 PAPPA2Q9BXP8 1791 aa12.09□□□□□ -0.47
VAPA-202ENST00000400000 PF4V1P10720 104 aa12.08□□□□□ -0.47
VAPA-202ENST00000400000 PPOXP50336 477 aa12.08□□□□□ -0.47
VAPA-202ENST00000400000 LEAP2Q969E1 77 aa12.08□□□□□ -0.47
VAPA-202ENST00000400000 AMDHD2Q9Y303 409 aa12.08□□□□□ -0.47
VAPA-202ENST00000400000 CCDC88CQ9P219 2028 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 SNRPGP15A8MWD9 76 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 PPP1CCP36873 323 aaKnown RBP12.08□□□□□ -0.48
VAPA-202ENST00000400000 ROM1Q03395 351 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 C16orf82Q7Z2V1 217 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 OR2W3Q7Z3T1 314 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 OOEPA6NGQ2 149 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 GABRA1P14867 456 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 RNF7Q9UBF6 113 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 FBXL17Q9UF56 701 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 WSB1Q9Y6I7 421 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 DOCK1Q14185 1865 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 OR5B21A6NL26 309 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 FFAR1O14842 300 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 TWIST1Q15672 202 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 C12orf73Q69YU5 71 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 SCN1AP35498 2009 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 TRPM6Q9BX84 2022 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 CRYBB2P43320 205 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 OR8G5Q8NG78 346 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 OR4D11Q8NGI4 311 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 PSG2P11465 335 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 KRTCAP3Q53RY4 240 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 HCP5Q6MZN7 132 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 OR4S2Q8NH73 311 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 ATP5SQ99766 215 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 FRRS1LQ9P0K9 344 aa12.08□□□□□ -0.48
VAPA-202ENST00000400000 TRAV20A0A0B4J274 112 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 TRDCB7Z8K6 153 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 MELTFP08582 738 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 KIR2DS2P43631 304 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 SPCS3P61009 180 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 LILRA6Q6PI73 481 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 OR2Y1Q8NGV0 311 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 GPX7Q96SL4 187 aaPredicted RBP12.07□□□□□ -0.48
VAPA-202ENST00000400000 IL20Q9NYY1 176 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 CASP8AP2Q9UKL3 1982 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 MFNGO00587 321 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 CLEC2AQ6UVW9 174 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 D2HGDHQ8N465 521 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 GPHA2Q96T91 129 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 ZNF665Q9H7R5 613 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 MRM2Q9UI43 246 aaKnown RBP12.07□□□□□ -0.48
VAPA-202ENST00000400000 PRSS44E7EML9 344 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 LINC01387J3KSC0 135 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 REG1AP05451 166 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 AREGP15514 252 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 MDH2P40926 338 aaKnown RBP12.07□□□□□ -0.48
VAPA-202ENST00000400000 OR8D4Q8NGM9 314 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 NEIL1Q96FI4 390 aaPredicted RBP12.07□□□□□ -0.48
VAPA-202ENST00000400000 TTTY12Q9BZ98 90 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 DTX4Q9Y2E6 619 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 C16orf97H3BN30 126 aa12.07□□□□□ -0.48
VAPA-202ENST00000400000 FAM157CP0CG43 387 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms