RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CBR1P16152 277 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 ZNF826PQ6ZT77 177 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 NABP1Q96AH0 204 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 LYZL4Q96KX0 146 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 GP6Q9HCN6 339 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 KCNJ16Q9NPI9 418 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 ATPIF1Q9UII2 106 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 ETV2O00321 342 aaPredicted RBP12.1□□□□□ -0.47
SCAF4-202ENST00000399804 MFNGO00587 321 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 SSX5O60225 188 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 CRHP06850 196 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 HEXAP06865 529 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 CTSSP25774 331 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 TMEM50BP56557 158 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 PLGLAQ15195 96 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 PRAMEF5Q5TYX0 476 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 CCL17Q92583 94 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 TMED3Q9Y3Q3 217 aa12.1□□□□□ -0.47
SCAF4-202ENST00000399804 LOC105371267A0A1B0GV96 52 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 ATP6V1G2-DDX39BF2Z307 99 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 LGALS8O00214 317 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 TAAR5O14804 337 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 CFDP00746 253 aaPredicted RBP12.09□□□□□ -0.47
SCAF4-202ENST00000399804 ZNF816Q0VGE8 651 aaPredicted RBP12.09□□□□□ -0.47
SCAF4-202ENST00000399804 RPUSD3Q6P087 351 aaKnown RBP12.09□□□□□ -0.47
SCAF4-202ENST00000399804 MOGAT3Q86VF5 341 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 SLC25A28Q96A46 364 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 FBXO7Q9Y3I1 522 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 C5orf63A6NC05 138 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 PRSS44E7EML9 344 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 CST7O76096 145 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 IAPPP10997 89 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 MDH2P40926 338 aaKnown RBP12.09□□□□□ -0.47
SCAF4-202ENST00000399804 IGSF11Q5DX21 431 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 SDSLQ96GA7 329 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 SCNM1Q9BWG6 230 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 CCL28Q9NRJ3 127 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 SPRR3Q9UBC9 169 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 ENSAO43768 121 aaKnown RBP12.09□□□□□ -0.47
SCAF4-202ENST00000399804 SNCAP37840 140 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 P2RY4P51582 365 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 NRN1LQ496H8 165 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 H3F3CQ6NXT2 135 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 CALHM1Q8IU99 346 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 GAPTQ8N292 157 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 MARC2Q969Z3 335 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 PURGQ9UJV8 347 aaKnown RBP12.09□□□□□ -0.47
SCAF4-202ENST00000399804 GPR132Q9UNW8 380 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 KIAA1549LQ6ZVL6 1849 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 BTCP35070 178 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 PPT1P50897 306 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 F2RL1P55085 397 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 RPP30P78346 268 aaKnown RBP12.09□□□□□ -0.47
SCAF4-202ENST00000399804 OR1S2Q8NGQ3 325 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 KLF14Q8TD94 323 aaPredicted RBP12.09□□□□□ -0.47
SCAF4-202ENST00000399804 CA5BP1Q8WTZ4 195 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 RASL12Q9NYN1 266 aa12.09□□□□□ -0.47
SCAF4-202ENST00000399804 KRBOX1C9JBD0 128 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 RAB31Q13636 194 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 AANATQ16613 207 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 BCL2L2Q92843 193 aaPredicted RBP12.08□□□□□ -0.48
SCAF4-202ENST00000399804 MRPL24Q96A35 216 aaKnown RBP12.08□□□□□ -0.48
SCAF4-202ENST00000399804 C1QTNF5Q9BXJ0 243 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 PSG11Q9UQ72 335 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 MED13Q9UHV7 2174 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 TRGV10A0A0A0MS01 117 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 AQP7O14520 342 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 MPPED1O15442 326 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 ADAM20O43506 726 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 IFNA1P01562 189 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 HOXB1P14653 301 aaPredicted RBP12.08□□□□□ -0.48
SCAF4-202ENST00000399804 OR2G3Q8NGZ4 309 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 ABHD17AQ96GS6 310 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 REPIN1Q9BWE0 567 aaKnown RBP12.08□□□□□ -0.48
SCAF4-202ENST00000399804 RCL1Q9Y2P8 373 aaKnown RBP12.08□□□□□ -0.48
SCAF4-202ENST00000399804 CD74P04233 296 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 TBC1D26Q86UD7 250 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 PAQR4Q8N4S7 273 aaPredicted RBP12.08□□□□□ -0.48
SCAF4-202ENST00000399804 C9orf106Q8NAJ2 232 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 CNTNAP3Q9BZ76 1288 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 KCNMB2Q9Y691 235 aa12.08□□□□□ -0.48
SCAF4-202ENST00000399804 IGKV3D-15A0A087WSY6 115 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 CHATP28329 748 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 ASCL1P50553 236 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 ESPL1Q14674 2120 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 PRSS54Q6PEW0 395 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 HSF4Q9ULV5 492 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 SCTP09683 121 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 SEZ6L2Q6UXD5 910 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 LYZL2Q7Z4W2 148 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 TPRX1Q8N7U7 411 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 RBMXL1Q96E39 390 aaKnown RBP12.07□□□□□ -0.48
SCAF4-202ENST00000399804 LRFN3Q9BTN0 628 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 INTS1Q8N201 2190 aaKnown RBP12.07□□□□□ -0.48
SCAF4-202ENST00000399804 CDK2AP1O14519 115 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 TOR1AO14656 332 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 MELTFP08582 738 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 CCL1P22362 96 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 ERVS71-1P61550 626 aa12.07□□□□□ -0.48
SCAF4-202ENST00000399804 TAGLNQ01995 201 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms