RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 MPZP25189 248 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 NUBP1P53384 320 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 MEF2BQ02080 365 aaPredicted RBP8.16□□□□□ -1.1
COL28A1-201ENST00000399429 DOCK1Q14185 1865 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF611Q8N823 705 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 OR10J5Q8NHC4 309 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 BAHD1Q8TBE0 780 aaPredicted RBP8.16□□□□□ -1.1
COL28A1-201ENST00000399429 NAT6Q93015 286 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 VSTM2LQ96N03 204 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 WFDC1Q9HC57 220 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 GDE1Q9NZC3 331 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 CACNG5Q9UF02 275 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 WIPI2Q9Y4P8 454 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 MTCH2Q9Y6C9 303 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 LCTP09848 1927 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 CRYM-AS1A6NIL9 109 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 FAM166BA8MTA8 275 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 C11orf94C9JXX5 98 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 CDS2O95674 445 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 NRASP01111 189 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 KRASP01116 189 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 GLB1P16278 677 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 ICAM4Q14773 271 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 MMDQ15546 238 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 CNKSR3Q6P9H4 555 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 Q6ZSR6 202 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 DEFB119Q8N690 84 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 CPEB3Q8NE35 698 aaKnown RBP8.16□□□□□ -1.1
COL28A1-201ENST00000399429 RDH5Q92781 318 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 ADIPOR1Q96A54 375 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 MIEN1Q9BRT3 115 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 HDAC8Q9BY41 377 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 MTCH1Q9NZJ7 389 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 UQCR10Q9UDW1 63 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 HCFC2Q9Y5Z7 792 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 SNURFLB1AK76 121 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 ASAH2BP0C7U1 165 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 SLC25A6P12236 298 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 APOBEC1P41238 236 aaKnown RBP8.16□□□□□ -1.1
COL28A1-201ENST00000399429 DEFB103AP81534 67 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF684Q5T5D7 378 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 STUMQ69YW2 141 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 SLC25A26Q70HW3 274 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 OSR2Q8N2R0 312 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 LIPHQ8WWY8 451 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 ZCCHC14Q8WYQ9 949 aaKnown RBP8.16□□□□□ -1.1
COL28A1-201ENST00000399429 MESP1Q9BRJ9 268 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 RPRMQ9NS64 109 aa8.16□□□□□ -1.1
COL28A1-201ENST00000399429 IGHV3-20A0A0C4DH32 117 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 CD99P14209 185 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 VDAC1P21796 283 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 TCL1AP56279 114 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 SLC38A11Q08AI6 406 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 RUNX3Q13761 415 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 HLA-DRB5Q30154 266 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 ZNF808Q8N4W9 903 aaPredicted RBP8.15□□□□□ -1.1
COL28A1-201ENST00000399429 OR1K1Q8NGR3 316 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 OR2AE1Q8NHA4 323 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 MVB12AQ96EY5 273 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 DIRC2Q96SL1 478 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 NEU1Q99519 415 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 H0YIG0 161 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 MKRN2OSH3BPM6 223 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 PLPP3O14495 311 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 SUPT4H1P63272 117 aaKnown RBP8.15□□□□□ -1.1
COL28A1-201ENST00000399429 ROM1Q03395 351 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 SRSF4Q08170 494 aaKnown RBP8.15□□□□□ -1.1
COL28A1-201ENST00000399429 RAB31Q13636 194 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 TEX38Q6PEX7 206 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 SYT13Q7L8C5 426 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 RTN4RL2Q86UN3 420 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 CISD2Q8N5K1 135 aaKnown RBP8.15□□□□□ -1.1
COL28A1-201ENST00000399429 GPX7Q96SL4 187 aaPredicted RBP8.15□□□□□ -1.1
COL28A1-201ENST00000399429 TRAPPC2LQ9UL33 140 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 DENND4AQ7Z401 1863 aa8.15□□□□□ -1.1
COL28A1-201ENST00000399429 TRBV11-1A0A0K0K1C0 115 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 PPYP01298 95 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 EGR1P18146 543 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 RPS4Y1P22090 263 aaKnown RBP8.15□□□□□ -1.11
COL28A1-201ENST00000399429 HOXA6P31267 233 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 THBS4P35443 961 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 THBS3P49746 956 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 TMEM50BP56557 158 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 PAFAH1B2P68402 229 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 SLC35B1P78383 322 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 RPL24P83731 157 aaKnown RBP8.15□□□□□ -1.11
COL28A1-201ENST00000399429 ZXDAP98168 799 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 Q56UQ5 140 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 OR4B1Q8NGF8 309 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 RAB40CQ96S21 281 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 TMEM204Q9BSN7 226 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 ANGPTL4Q9BY76 406 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 IGKV1D-42A0A075B6H8 117 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 KIR2DS1A0A191URI9 304 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 LOC102723971A0A1B0GUV8 181 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 IGSF23A1L1A6 192 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 IL33O95760 270 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 HOXC8P31273 242 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 KIR2DS4P43632 304 aa8.15□□□□□ -1.11
COL28A1-201ENST00000399429 EDDM3BP56851 147 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms