RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 PAK1IP1Q9NWT1 392 aaPredicted RBP12□□□□□ -0.49
SMIM11A-203ENST00000399299 A0A087X0M5 115 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 A0A1B0GX30 115 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 A6NDX4 124 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 ANKRD65E5RJM6 399 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 MYL12BO14950 172 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 IGLV1-47P01700 117 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 CD1AP06126 327 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 HTR1DP28221 377 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 OR3A4PP47883 348 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 WNT4P56705 351 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 BDH1Q02338 343 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 PLA1AQ53H76 456 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 AHSA2Q719I0 299 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 LINC00596Q86U02 117 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 ABHD12Q8N2K0 398 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 STX19Q8N4C7 294 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 OR4D6Q8NGJ1 314 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 OR10K1Q8NGX5 313 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 OR2T6Q8NHC8 308 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 NR1H4Q96RI1 486 aaPredicted RBP11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 BARHL1Q9BZE3 327 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 METTL9Q9H1A3 318 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 PPIL3Q9H2H8 161 aaKnown RBP11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 FKBP14Q9NWM8 211 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 CKLFQ9UBR5 152 aa11.99□□□□□ -0.49
SMIM11A-203ENST00000399299 TRBV5-7A0A0A0MS05 114 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 KBTBD11-OT1A0A1B0GTJ5 212 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 ZNF780AO75290 641 aaPredicted RBP11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 CDRT1O95170 752 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 HTR3BO95264 441 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 CGB3P0DN86 165 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 CGB7P0DN87 165 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 C21orf33P30042 268 aaPredicted RBP11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 RAB13P51153 203 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 RBM11P57052 281 aaKnown RBP11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 PIGYQ3MUY2 71 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 CCBE1Q6UXH8 406 aaPredicted RBP11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 OSR2Q8N2R0 312 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 ZFP41Q8N8Y5 198 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 ZNF565Q8N9K5 539 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 BPIFB6Q8NFQ5 453 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 THRSPQ92748 146 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 CREB3L1Q96BA8 519 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 ORAI1Q96D31 301 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 S100A13Q99584 98 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 ZNF184Q99676 751 aaPredicted RBP11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 MMP27Q9H306 513 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 LINC00574Q9H8X3 128 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 PCDHB16Q9NRJ7 776 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 DPM3Q9P2X0 92 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 ST3GAL6Q9Y274 331 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 HILPDAQ9Y5L2 63 aa11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 TET2Q6N021 2002 aaPredicted RBP11.98□□□□□ -0.49
SMIM11A-203ENST00000399299 TRAV8-7A0A075B6U6 113 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 FAM90A22PA8MWA6 464 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 F2RL2O00254 374 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 CSTBP04080 98 aaKnown RBP11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 GDNFP39905 211 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 SLC34A1Q06495 639 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 C17orf58Q2M2W7 97 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 MPV17LQ2QL34 196 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 RSBN1Q5VWQ0 802 aaPredicted RBP11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 RNLSQ5VYX0 342 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 BAIAP2L2Q6UXY1 529 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 CDH26Q8IXH8 852 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 Q8N2B8 174 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 NANOGP1Q8N7R0 232 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 OR14A2Q96R54 314 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 NKX3-1Q99801 234 aaPredicted RBP11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 ZNF702PQ9H963 129 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 ZNF286AQ9HBT8 521 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 ING3Q9NXR8 418 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 KIF25Q9UIL4 384 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 ING4Q9UNL4 249 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 FOXJ3Q9UPW0 622 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 SIGLEC9Q9Y336 463 aa11.97□□□□□ -0.49
SMIM11A-203ENST00000399299 MEIKINA0A087WXM9 373 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 LEUTXA8MZ59 168 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 HSPB6O14558 160 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 OR7C1O76099 320 aaPredicted RBP11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 CELP19835 753 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 CEACAM3P40198 252 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 GLP1RP43220 463 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 ARHGDIBP52566 201 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 GPR176Q14439 515 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 HERPUD1Q15011 391 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 C2orf68Q2NKX9 166 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 HLA-DRB5Q30154 266 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 Q6ZTK2 550 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 TMEM219Q86XT9 240 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 OR13A1Q8NGR1 328 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 PLPPR1Q8TBJ4 325 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 KIRREL1Q96J84 757 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 DERL3Q96Q80 235 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 CALYQ9NYX4 217 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 NKX1-2Q9UD57 310 aaPredicted RBP11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 ERGIC3Q9Y282 383 aa11.96□□□□□ -0.49
SMIM11A-203ENST00000399299 PNMA8CA0A1B0GUJ8 204 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM172BPA6NC97 362 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms