RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 MAGEA5P43359 124 aa12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 EWSR1Q01844 656 aaKnown RBP eCLIP12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 AWAT1Q58HT5 328 aa12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 AVPI1Q5T686 147 aa12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 LINC00696Q6ZRV3 163 aa12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 WDR5BQ86VZ2 330 aa12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 ZNF100Q8IYN0 542 aa12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 TMEM217Q8N7C4 229 aa12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 LILRB1Q8NHL6 650 aaPredicted RBP12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 FAM213BQ8TBF2 198 aa12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 NEK7Q8TDX7 302 aa12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 CCL28Q9NRJ3 127 aa12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 IL36GQ9NZH8 169 aa12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 MAP1BP46821 2468 aaKnown RBP12.46□□□□□ -0.42
CCDC144A-205ENST00000399264 ZNF732B4DXR9 585 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 HS3ST1O14792 307 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 ARG1P05089 322 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 PCBD1P61457 104 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 HABP2Q14520 560 aaPredicted RBP12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 TMEM211Q6ICI0 200 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 SPSB4Q96A44 273 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 SYT3Q9BQG1 590 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 GINS3Q9BRX5 216 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 REPIN1Q9BWE0 567 aaKnown RBP12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 C19orf12Q9NSK7 152 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 UBE2J1Q9Y385 318 aaPredicted RBP12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 SVILO95425 2214 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 A0A1W2PPE3 182 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 PQLC2LA1A4F0 135 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 LAMTOR5O43504 91 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 ADAM20O43506 726 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 EPHA1P21709 976 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 ITGA3P26006 1051 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 SHEQ5VZ18 495 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 C6orf15Q6UXA7 325 aaPredicted RBP12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 COLCA1Q6ZS62 124 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 ODF3L1Q8IXM7 274 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 CPNE4Q96A23 557 aaPredicted RBP12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 BOD1Q96IK1 185 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 TMEM222Q9H0R3 208 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 FOXJ2Q9P0K8 574 aa12.45□□□□□ -0.42
CCDC144A-205ENST00000399264 C7orf77A4D0Y5 90 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 A6NLC8 198 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 ZNF724A8MTY0 619 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 PROB1E7EW31 1015 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 M0R036 132 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 LHX2P50458 406 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 DUSP3P51452 185 aaPredicted RBP12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 SNRPEP62304 92 aaKnown RBP12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 RDH5Q92781 318 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 C12orf57Q99622 126 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 RGCCQ9H4X1 137 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 GLRX2Q9NS18 164 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 EP300Q09472 2414 aaPredicted RBP12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 SLC22A20A6NK97 555 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 RPL36A-HNRNPH2H7BZ11 118 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 SERPINA7P05543 415 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 SEC11BP0C7V7 166 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 ZNF44P15621 663 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 RUNX1Q01196 453 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 SPATA46Q5T0L3 261 aa12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 ZFP62Q8NB50 900 aaPredicted RBP12.44□□□□□ -0.42
CCDC144A-205ENST00000399264 BORCS7-ASMTA0A0B4J1R7 106 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 A0A1W2PPH5 198 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 HEXAP06865 529 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 PLA2G5P39877 138 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 CLDN18P56856 261 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 DPPA2Q7Z7J5 298 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 SELENOHQ8IZQ5 122 aaKnown RBP12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 OR2C3Q8N628 320 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 OR2M7Q8NG81 312 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 HIST1H2BAQ96A08 127 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 Q9N2K0 584 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 POMT1Q9Y6A1 747 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 USF3Q68DE3 2245 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 hCG_1809904A0A1W2PP81 198 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 A0A1W2PR64 198 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 A0A1W2PRV1 198 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 TRDCB7Z8K6 153 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 H3BP45 60 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 CER1O95813 267 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 FBP1P09467 338 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 UCP3P55916 312 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 ZNF695Q8IW36 515 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 CD300LFQ8TDQ1 290 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 PRDM14Q9GZV8 571 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 C11orf1Q9H5F2 150 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 COA4Q9NYJ1 87 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 ARHGAP21Q5T5U3 1957 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 A0A0G2JRQ6 117 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 C9orf172C9J069 976 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 NAPSAO96009 420 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 ATP6V0CP27449 155 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 HOXA6P31267 233 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 NKX2-1P43699 371 aaPredicted RBP12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 RAB1AP62820 205 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 HOXA4Q00056 320 aaPredicted RBP12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 SSPNQ14714 243 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 KRBOX4Q5JUW0 171 aa12.43□□□□□ -0.42
CCDC144A-205ENST00000399264 GPR157Q5UAW9 335 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms