RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 PIN1Q13526 163 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 IL13RA2Q14627 380 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 NCOA6Q14686 2063 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 TWIST1Q15672 202 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ZNF468Q5VIY5 522 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 STUMQ69YW2 141 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 GLIPR1L1Q6UWM5 242 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 DDB2Q92466 427 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 MUS81Q96NY9 551 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ANGPTL4Q9BY76 406 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR2W1Q9Y3N9 320 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 TRAV27A0A087WT01 109 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 TRAV9-2A0A087WT02 112 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 A0A0B4J2E0 115 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 A0A1B0GX12 115 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 G3V3Q6 166 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 UPK1AO00322 258 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 RGS13O14921 159 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 HPRT1P00492 218 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 LALBAP00709 142 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 TYMSP04818 313 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 CEACAM6P40199 344 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ETV1P50549 477 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 RNASE12Q5GAN4 147 aaKnown RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 H3F3CQ6NXT2 135 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 CFAP161Q6P656 301 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ACOT7LQ6ZUV0 252 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 TMUB2Q71RG4 321 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 BPIFA4PQ86YQ2 179 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 MMD2Q8IY49 270 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 C16orf52Q8NHV5 167 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 TMED6Q8WW62 240 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SMIM7Q9BQ49 75 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 RNF122Q9H9V4 155 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 MTCH1Q9NZJ7 389 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 TBC1D29Q9UFV1 150 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 FAM208BQ5VWN6 2430 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 NOTCH3Q9UM47 2321 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ONECUT2O95948 504 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 PNPP00491 289 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 IGLV3-25P01717 112 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 CTSDP07339 412 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 EDN3P14138 238 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 RPL35P42766 123 aaKnown RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 DLK1P80370 383 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 DEFA6Q01524 100 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 CORO6Q6QEF8 472 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.41□□□□□ -2.021e-6■■■■■ 28.5
CHD9-202ENST00000398510 DNM1P46Q6ZS02 220 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR52I1Q8NGK6 324 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR52I2Q8NH67 350 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SCNM1Q9BWG6 230 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 PRDM14Q9GZV8 571 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR2D2Q9H210 308 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SPANXCQ9NY87 97 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 WASHC3Q9Y3C0 194 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 PLCE1Q9P212 2302 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 IGHV1OR21-1A0A087WYE8 117 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OOSP1A8MZH6 123 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ETHE1O95571 254 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 GAPDHP04406 335 aaKnown RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 FAM71E1Q6IPT2 247 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 APOOLQ6UXV4 268 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 MOB3BQ86TA1 216 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 MDP1Q86V88 176 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 RNF152Q8N8N0 203 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR10C1Q96KK4 312 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ATOH8Q96SQ7 321 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 TIMP4Q99727 224 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ABHD14AQ9BUJ0 271 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 MRPL32Q9BYC8 188 aaKnown RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 SLC25A18Q9H1K4 315 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ACER3Q9NUN7 267 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 MARCH5Q9NX47 278 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 WRAP73Q9P2S5 460 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 A0A1B0GWA3 101 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ZNF705GA8MUZ8 300 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 J3QLI3 93 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ALDOCP09972 364 aaKnown RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 HLA-GP17693 338 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 ANOS1P23352 680 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SOX4Q06945 474 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 ZNF345Q14585 488 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 C10orf113Q5VZT2 155 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 FAM53AQ6NSI3 398 aaPredicted RBP2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR9I1Q8NGQ6 314 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 LGALS14Q8TCE9 139 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 SMIM4Q8WVI0 70 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 FAM210BQ96KR6 192 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 P2RX4Q99571 388 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 INPP5KQ9BT40 448 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 OR2J1Q9GZK6 312 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 UQCC1Q9NVA1 299 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 NTMQ9P121 344 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 PPIAL4EA0A075B759 164 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 TRAV20A0A0B4J274 112 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 LOC102723971A0A1B0GUV8 181 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 PPIAL4DF5H284 164 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 M0QYG6 137 aa2.41□□□□□ -2.02
CHD9-202ENST00000398510 PPIAL4FP0DN26 164 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms