RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 FUT3P21217 361 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 MSR1P21757 451 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 FXYD4P59646 89 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 TAF9Q16594 264 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 ZNF506Q5JVG8 444 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 RHBDD2Q6NTF9 364 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 SLC25A26Q70HW3 274 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 SLC16A14Q7RTX9 510 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 C20orf196Q8IYI0 205 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 DYRK2Q92630 601 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 ANXA10Q9UJ72 324 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 AQP7P3A6NL99 342 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 ZNF850A8MQ14 1090 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 SPRY1O43609 319 aaPredicted RBP13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 IGLV3-1P01715 115 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 CSNK1A1P48729 337 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 HERPUD1Q15011 391 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 ZNF573Q86YE8 665 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 OR5L2Q8NGL0 311 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 RNF138Q8WVD3 245 aa13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 ZNF385AQ96PM9 386 aaKnown RBP13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 NXT1Q9UKK6 140 aaKnown RBP13.85□□□□□ -0.19
CHMP1A-201ENST00000397901 TLX3O43711 291 aaPredicted RBP13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 OR4A8P0C604 315 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 OR3A1P47881 315 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 PHLDA2Q53GA4 152 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 CDCP2Q5VXM1 449 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 BRICD5Q6PL45 260 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 REEP6Q96HR9 211 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 WDFY3Q8IZQ1 3526 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 FAM221AA4D161 298 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 RRP8O43159 456 aaKnown RBP13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 ECI1P42126 302 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 MTCP1P56278 107 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 ENDOGQ14249 297 aaKnown RBP13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 SHBQ15464 509 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 RSPO1Q2MKA7 263 aaPredicted RBP13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 SNAI3Q3KNW1 292 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 SAPCD1Q5SSQ6 148 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 LYZL2Q7Z4W2 148 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 GJC3Q8NFK1 279 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 OR10A7Q8NGE5 316 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 PP6455Q8WZ26 134 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 THOC3Q96J01 351 aaKnown RBP13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 Q96M66 194 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 RBM24Q9BX46 236 aaKnown RBP13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 AK3Q9UIJ7 227 aa13.84□□□□□ -0.19
CHMP1A-201ENST00000397901 FAM230AA0A1W2PPH8 454 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 ZFAND5O76080 213 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 CYB5R3P00387 301 aaPredicted RBP13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 OPN1MWP04001 364 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 ZNF728P0DKX0 622 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 OPN1MW2P0DN77 364 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 OPN1MW3P0DN78 364 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 PNRC1Q12796 327 aaPredicted RBP13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 ABCA11PQ4W5N1 156 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 C1orf194Q5T5A4 169 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 ZNF774Q6NX45 483 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 TEX38Q6PEX7 206 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 WDR74Q6RFH5 385 aaPredicted RBP13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 OR2AE1Q8NHA4 323 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 OR6C1Q96RD1 312 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 IGLV3-12A0A075B6K2 115 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 IGLV3-32A0A0A0MS00 114 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 A0A0U1RQV5 110 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 M0R135 149 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 CTSSP25774 331 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 CXCL12P48061 93 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 NOVA1P51513 510 aaKnown RBP13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 SSPNQ14714 243 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 ARL6IP1Q15041 203 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 CPEB2Q7Z5Q1 589 aaKnown RBP13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 KMT5CQ86Y97 462 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 OR5L1Q8NGL2 311 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 OR2G3Q8NGZ4 309 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 RTN4IP1Q8WWV3 396 aaPredicted RBP13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 ZNF799Q96GE5 643 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 SRD5A3Q9H8P0 318 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 PLEK2Q9NYT0 353 aa13.83□□□□□ -0.2
CHMP1A-201ENST00000397901 NSG1A0A0A6YYJ2 146 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 XKRY2A2RUG3 117 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 ASCL1P50553 236 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 ZNF133P52736 654 aaPredicted RBP13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 COL10A1Q03692 680 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 ARSJQ5FYB0 599 aaPredicted RBP13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 RTL6Q6ICC9 239 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 OR10G4Q8NGN3 311 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 CABLES2Q9BTV7 478 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 ZNF700Q9H0M5 742 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 NAA60Q9H7X0 242 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 RCL1Q9Y2P8 373 aaKnown RBP13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 B3GALT1Q9Y5Z6 326 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 KIR2DL5BA0A0G2JN68 375 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 KIR2DL5BA0A0G2JPC4 375 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 A0A1B0GU03 582 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 A6NNC1 897 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 CA11O75493 328 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 CST2P09228 141 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 CCKARP32238 428 aa13.82□□□□□ -0.2
CHMP1A-201ENST00000397901 IL13RA2Q14627 380 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms