RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 LHBP01229 141 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 HPXP02790 462 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 GSTT2BP0CG30 244 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 GDNFP39905 211 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 OLFML2AQ68BL7 652 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 BRICD5Q6PL45 260 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 TRAPPC6BQ86SZ2 158 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 ZNF554Q86TJ5 538 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 RTN4RL2Q86UN3 420 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 ZNF525Q8N782 197 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 SETD6Q8TBK2 473 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 NEK7Q8TDX7 302 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 GPX8Q8TED1 209 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 NUDCD2Q8WVJ2 157 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 ST8SIA4Q92187 359 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 SEH1LQ96EE3 360 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 FAAP24Q9BTP7 215 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 SHARPINQ9H0F6 387 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 IFT22Q9H7X7 185 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.08□□□□□ -0.64
SEC13-209ENST00000397117 NLKQ9UBE8 527 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 KLK11Q9UBX7 282 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 KCNK7Q9Y2U2 307 aa11.08□□□□□ -0.64
SEC13-209ENST00000397117 UBE2QL1A1L167 161 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 MEIS3P1A6NDR6 274 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 H7C417 338 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 SIRPB1O00241 398 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 HSPB6O14558 160 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 LANCL1O43813 399 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 ORC5O43913 435 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 CA11O75493 328 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 ECDO95905 644 aaPredicted RBP11.07□□□□□ -0.64
SEC13-209ENST00000397117 OR2H2O95918 312 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 EGR1P18146 543 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 AP3S2P59780 193 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 ACTBP60709 375 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 ACTG1P63261 375 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 HOXA4Q00056 320 aaPredicted RBP11.07□□□□□ -0.64
SEC13-209ENST00000397117 SSBP1Q04837 148 aaKnown RBP11.07□□□□□ -0.64
SEC13-209ENST00000397117 RBM39Q14498 530 aaKnown RBP11.07□□□□□ -0.64
SEC13-209ENST00000397117 MICBQ29980 383 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 HFEQ30201 348 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 SFRP4Q6FHJ7 346 aaPredicted RBP11.07□□□□□ -0.64
SEC13-209ENST00000397117 TOMM5Q8N4H5 51 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 SUMF2Q8NBJ7 301 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 C10orf105Q8TEF2 133 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 TRIM63Q969Q1 353 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 SULT4A1Q9BR01 284 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 DPCDQ9BVM2 203 aaPredicted RBP11.07□□□□□ -0.64
SEC13-209ENST00000397117 IFT46Q9NQC8 304 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 TMEM106BQ9NUM4 274 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 RCC2Q9P258 522 aaKnown RBP11.07□□□□□ -0.64
SEC13-209ENST00000397117 MTFP1Q9UDX5 166 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 WIPI2Q9Y4P8 454 aa11.07□□□□□ -0.64
SEC13-209ENST00000397117 IGHV3OR15-7A0A075B7D8 119 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 RFPL4AA6NLU0 287 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 OR2AT4A6NND4 320 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 RFPL4AL1F8VTS6 287 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 PTTG1O95997 202 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 GLAP06280 429 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 CD80P33681 288 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 RBMXP38159 391 aaKnown RBP11.06□□□□□ -0.64
SEC13-209ENST00000397117 CBX5P45973 191 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 SRSF2Q01130 221 aaKnown RBP11.06□□□□□ -0.64
SEC13-209ENST00000397117 PAN3Q58A45 887 aaKnown RBP11.06□□□□□ -0.64
SEC13-209ENST00000397117 Q6P435 159 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 POC5Q8NA72 575 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 NEU4Q8WWR8 484 aaPredicted RBP11.06□□□□□ -0.64
SEC13-209ENST00000397117 FAM168AQ92567 244 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 RDH5Q92781 318 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 CMSS1Q9BQ75 279 aaKnown RBP11.06□□□□□ -0.64
SEC13-209ENST00000397117 TAS2R8Q9NYW2 309 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 AK3Q9UIJ7 227 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 RBMX2Q9Y388 322 aaKnown RBP11.06□□□□□ -0.64
SEC13-209ENST00000397117 CACNG2Q9Y698 323 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 TRAV24A0A0B4J272 114 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 TMEM178BH3BS89 294 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.06□□□□□ -0.64
SEC13-209ENST00000397117 HAX1O00165 279 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 SLC33A1O00400 549 aaPredicted RBP11.06□□□□□ -0.64
SEC13-209ENST00000397117 CSF1P09603 554 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 PSG2P11465 335 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 ZNF16P17020 682 aaPredicted RBP11.06□□□□□ -0.64
SEC13-209ENST00000397117 PRDX2P32119 198 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 GABRA2P47869 451 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 ASAH1Q13510 395 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 TRIM16LQ309B1 348 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 BPIFB2Q8N4F0 458 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 OR5T2Q8NGG2 359 aa11.06□□□□□ -0.64
SEC13-209ENST00000397117 CHMP1AQ9HD42 196 aaPredicted RBP11.06□□□□□ -0.64
SEC13-209ENST00000397117 SVEP1Q4LDE5 3571 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 TRAV38-1A0A0B4J264 116 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 FUOMA2VDF0 154 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 OOEPA6NGQ2 149 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 CENPXA8MT69 81 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 SSX5O60225 188 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 ZNF205O95201 554 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 FCER2P06734 321 aa11.05□□□□□ -0.64
SEC13-209ENST00000397117 MUC1P15941 1255 aaPredicted RBP11.05□□□□□ -0.64
SEC13-209ENST00000397117 SRD5A1P18405 259 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms