RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 KNG1P01042 644 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 IGHV1-69P01742 117 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 SOX2P48431 317 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 RBP2P50120 134 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 BCAP31P51572 246 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 ERVK11-1P61568 191 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 MRPS10P82664 201 aaKnown RBP11.99□□□□□ -0.49
SEC13-208ENST00000397109 C12orf54Q6X4T0 127 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 CDH26Q8IXH8 852 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 OR5D14Q8NGL3 314 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 LHX4Q969G2 390 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 ZDHHC16Q969W1 377 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 SLC25A28Q96A46 364 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 SPSB1Q96BD6 273 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 S100A16Q96FQ6 103 aaKnown RBP11.99□□□□□ -0.49
SEC13-208ENST00000397109 GFI1Q99684 422 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 PRDM13Q9H4Q3 707 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 STEAP1Q9UHE8 339 aa11.99□□□□□ -0.49
SEC13-208ENST00000397109 IGKV1-9A0A0C4DH69 117 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 A0A1W2PQ09 198 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 M0R1W7 72 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 CYB5AP00167 134 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 TFF1P04155 84 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 DEFB112Q30KQ8 113 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 MZT2BQ6NZ67 158 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 LHFPL2Q6ZUX7 228 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 GDPD3Q7L5L3 318 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 VMO1Q7Z5L0 202 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 MKXQ8IYA7 352 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 Q8IYB0 196 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 TBC1D24Q9ULP9 559 aa11.98□□□□□ -0.49
SEC13-208ENST00000397109 IGKV1-27A0A075B6S5 117 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 SLC17A2O00624 439 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 GSTZ1O43708 216 aaPredicted RBP11.97□□□□□ -0.49
SEC13-208ENST00000397109 PAHP00439 452 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 EIF4EP06730 217 aaKnown RBP11.97□□□□□ -0.49
SEC13-208ENST00000397109 RNASE1P07998 156 aaKnown RBP11.97□□□□□ -0.49
SEC13-208ENST00000397109 INPP1P49441 399 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 COMPP49747 757 aaPredicted RBP11.97□□□□□ -0.49
SEC13-208ENST00000397109 MTCP1P56278 107 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 GUCA2AQ02747 115 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 P2RY14Q15391 338 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 CCBE1Q6UXH8 406 aaPredicted RBP11.97□□□□□ -0.49
SEC13-208ENST00000397109 SLC25A26Q70HW3 274 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 CD177Q8N6Q3 437 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 OR4M1Q8NGD0 313 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 DEDD2Q8WXF8 326 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 PTX4Q96A99 478 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 FAM234AQ9H0X4 552 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 LIN7BQ9HAP6 207 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 MTCH1Q9NZJ7 389 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 OR14J1Q9UGF5 321 aa11.97□□□□□ -0.49
SEC13-208ENST00000397109 SOX21Q9Y651 276 aaPredicted RBP11.97□□□□□ -0.49
SEC13-208ENST00000397109 TRAV8-7A0A075B6U6 113 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 A0A1W2PPH5 198 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 MAGEB3O15480 346 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 MAS1P04201 325 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 CHRM2P08172 466 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 SNRPBP14678 240 aaKnown RBP11.96□□□□□ -0.49
SEC13-208ENST00000397109 AZGP1P25311 298 aaKnown RBP11.96□□□□□ -0.49
SEC13-208ENST00000397109 SLC9A3R2Q15599 337 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 RUSC1-AS1Q66K80 236 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 FIP1L1Q6UN15 594 aaKnown RBP11.96□□□□□ -0.49
SEC13-208ENST00000397109 DUSP18Q8NEJ0 188 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 OR13C9Q8NGT0 318 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 OR5H6Q8NGV6 325 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 CHAC2Q8WUX2 184 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 SLAMF9Q96A28 289 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 RFT1Q96AA3 541 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 C1orf147Q96MC9 270 aaPredicted RBP11.96□□□□□ -0.49
SEC13-208ENST00000397109 DUX5Q96PT3 197 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 C7orf50Q9BRJ6 194 aaKnown RBP11.96□□□□□ -0.49
SEC13-208ENST00000397109 THAP7Q9BT49 309 aaPredicted RBP11.96□□□□□ -0.49
SEC13-208ENST00000397109 METTL8Q9H825 291 aaKnown RBP11.96□□□□□ -0.49
SEC13-208ENST00000397109 UNKLQ9H9P5 680 aaKnown RBP11.96□□□□□ -0.49
SEC13-208ENST00000397109 SEBOXQ9HB31 216 aaPredicted RBP11.96□□□□□ -0.49
SEC13-208ENST00000397109 TAS2R4Q9NYW5 299 aa11.96□□□□□ -0.49
SEC13-208ENST00000397109 hCG_2014768A0A024R1R8 64 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 A0A0A6YYH2 397 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 A6NJ64 397 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 ALDOBP05062 364 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 RAB3AP20336 220 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 RPL31P62899 125 aaKnown RBP11.95□□□□□ -0.5
SEC13-208ENST00000397109 C1orf100Q5SVJ3 147 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 NCR3LG1Q68D85 454 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 Q6YL49 198 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 FAM185AQ8N0U4 392 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 TMEM86BQ8N661 226 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 Q8N7P7 452 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 OR5D13Q8NGL4 314 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 OR6M1Q8NGM8 313 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 LGALS14Q8TCE9 139 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 UQCC2Q9BRT2 126 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 ELL3Q9HB65 397 aaPredicted RBP11.95□□□□□ -0.5
SEC13-208ENST00000397109 TMEM138Q9NPI0 162 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 SIRT7Q9NRC8 400 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 RBFOX1Q9NWB1 397 aaKnown RBP11.95□□□□□ -0.5
SEC13-208ENST00000397109 MDFIC2A0A1B0GVS7 189 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 TK1P04183 234 aa11.95□□□□□ -0.5
SEC13-208ENST00000397109 HKR1P10072 659 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms