RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CRIP3Q6Q6R5 217 aa8.53□□□□□ -1.04
TRIM39-203ENST00000396547 BCO1Q9HAY6 547 aa8.53□□□□□ -1.04
TRIM39-203ENST00000396547 KIAA1456Q9P272 454 aa8.53□□□□□ -1.04
TRIM39-203ENST00000396547 LAMP3Q9UQV4 416 aa8.53□□□□□ -1.04
TRIM39-203ENST00000396547 CELSR3Q9NYQ7 3312 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 C3orf85A0A1B0GTC6 90 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 DHRS3O75911 302 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 CLN3Q13286 438 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 TESK1Q15569 626 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF664Q8N3J9 261 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 C18orf12Q96KH6 178 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 GPR87Q9BY21 358 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 PLEKHF2Q9H8W4 249 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 PNRC2Q9NPJ4 139 aaKnown RBP8.52□□□□□ -1.05
TRIM39-203ENST00000396547 ST3GAL6Q9Y274 331 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 IGKV3D-11A0A0A0MRZ8 115 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 TRBV11-1A0A0K0K1C0 115 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 A0A1B0GWJ7 208 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 CLDN34H7C241 214 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 M0R135 149 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 IDH3GP51553 393 aaPredicted RBP8.52□□□□□ -1.05
TRIM39-203ENST00000396547 ELLP55199 621 aaPredicted RBP8.52□□□□□ -1.05
TRIM39-203ENST00000396547 ARL6IP1Q15041 203 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 OR10G3Q8NGC4 313 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 ST8SIA1Q92185 356 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 BORCS8Q96FH0 119 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF799Q96GE5 643 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 Q96M66 194 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 TMEM68Q96MH6 324 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 TWSG1Q9GZX9 223 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 OR14J1Q9UGF5 321 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 TMED3Q9Y3Q3 217 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 HS3ST3A1Q9Y663 406 aa8.52□□□□□ -1.05
TRIM39-203ENST00000396547 MPPED1O15442 326 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 TRAF3IP2O43734 574 aaPredicted RBP8.51□□□□□ -1.05
TRIM39-203ENST00000396547 TMEM50AO95807 157 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 ECI1P42126 302 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 BLKP51451 505 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 TLE4Q04727 773 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 TBC1D26Q86UD7 250 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 IL22RA1Q8N6P7 574 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 CLDND2Q8NHS1 167 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 PIGCQ92535 297 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 RPUSD4Q96CM3 377 aaKnown RBP8.51□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF837Q96EG3 531 aaPredicted RBP8.51□□□□□ -1.05
TRIM39-203ENST00000396547 VSIRQ9H7M9 311 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF286AQ9HBT8 521 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 PLA2G3Q9NZ20 509 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 THADAQ6YHU6 1953 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 KIAA2026Q5HYC2 2103 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 ELOA3CA0A087WX78 387 aaPredicted RBP8.51□□□□□ -1.05
TRIM39-203ENST00000396547 XKRY2A2RUG3 117 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 EREGO14944 169 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 TLX3O43711 291 aaPredicted RBP8.51□□□□□ -1.05
TRIM39-203ENST00000396547 GALNSP34059 522 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF133P52736 654 aaPredicted RBP8.51□□□□□ -1.05
TRIM39-203ENST00000396547 MLF1P58340 268 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 GRB2P62993 217 aaKnown RBP8.51□□□□□ -1.05
TRIM39-203ENST00000396547 PHYHD1Q5SRE7 291 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 SLC25A47Q6Q0C1 308 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF66Q6ZN08 573 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 MRPL41Q8IXM3 137 aaKnown RBP8.51□□□□□ -1.05
TRIM39-203ENST00000396547 OR4X1Q8NH49 305 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 M1APQ8TC57 530 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 FOXI3A8MTJ6 420 aaPredicted RBP8.51□□□□□ -1.05
TRIM39-203ENST00000396547 C3orf80F5H4A9 247 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 GZMBP10144 247 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 IAPPP10997 89 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 MAS1LP35410 378 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 CXCL12P48061 93 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 COL10A1Q03692 680 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF787Q6DD87 383 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 CCDC71LQ8N9Z2 235 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 SLC7A10Q9NS82 523 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 PPP1R14DQ9NXH3 145 aa8.51□□□□□ -1.05
TRIM39-203ENST00000396547 IGKV1-27A0A075B6S5 117 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 A0A1W2PPQ1 181 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 C9J4A7 227 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 AMBPP02760 352 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 FGF7P21781 194 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 P2RY6Q15077 328 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 Q6ZS52 159 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 GJC3Q8NFK1 279 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 OR4D5Q8NGN0 318 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 OR51H1Q8NH63 302 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF385AQ96PM9 386 aaKnown RBP8.5□□□□□ -1.05
TRIM39-203ENST00000396547 HIST1H2AAQ96QV6 131 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 UCK1Q9HA47 277 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 AURKAIP1Q9NWT8 199 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-203ENST00000396547 ABCA7Q8IZY2 2146 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 LAMTOR5O43504 91 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 SCGB1D1O95968 90 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 PPYP01298 95 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 IFNA5P01569 189 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 HSPB1P04792 205 aaKnown RBP8.5□□□□□ -1.05
TRIM39-203ENST00000396547 ZNF16P17020 682 aaPredicted RBP8.5□□□□□ -1.05
TRIM39-203ENST00000396547 RPS16P62249 146 aaKnown RBP8.5□□□□□ -1.05
TRIM39-203ENST00000396547 PMS2P11Q13670 270 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 RTP5Q14D33 572 aa8.5□□□□□ -1.05
TRIM39-203ENST00000396547 PRSS8Q16651 343 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms