RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 MAGT1Q9H0U3 335 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 PILRBQ9UKJ0 227 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 IGKV1D-13A0A0B4J2D9 117 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 CLEC18AA5D8T8 446 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A10PA6NDY2 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A18PA6NE21 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A16PA6NEW6 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A20PA6NIJ5 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A8PA6NJQ4 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A7PA6NKC0 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A22PA8MWA6 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A12PA8MX19 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A5PA8MXJ8 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A23PA8MXZ1 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 ADAM20O43506 726 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 P04436 131 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 SCTP09683 121 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A15PP0C7V4 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A13PP0C7W8 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A14PP0C7W9 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM90A24PP0C7X0 464 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 IGKV1-13P0DP09 117 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 OR2B8PP59922 312 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 NMSQ5H8A3 153 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 WIPI1Q5MNZ9 446 aaPredicted RBP13.49□□□□□ -0.25
HOXA3-202ENST00000396352 ADAM5Q6NVV9 412 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 GAPTQ8N292 157 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 SUMF2Q8NBJ7 301 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 CLEC18CQ8NCF0 446 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 OR8G5Q8NG78 346 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 PLPPR1Q8TBJ4 325 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 RBFOX3A6NFN3 312 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 RAB1AP62820 205 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 Q0VFX4 171 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 SRSF7Q16629 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
HOXA3-202ENST00000396352 HIKESHIQ53FT3 197 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 SOHLH1Q5JUK2 328 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 ZNF565Q8N9K5 539 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 SLAMF9Q96A28 289 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 PAPOLGQ9BWT3 736 aaKnown RBP13.49□□□□□ -0.25
HOXA3-202ENST00000396352 FAM86C1Q9NVL1 165 aa13.49□□□□□ -0.25
HOXA3-202ENST00000396352 PUS1Q9Y606 427 aaKnown RBP eCLIP13.49□□□□□ -0.25
HOXA3-202ENST00000396352 NTN3O00634 580 aaPredicted RBP13.48□□□□□ -0.25
HOXA3-202ENST00000396352 ZNF806P0C7X5 589 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 EPHA1P21709 976 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 SPIN3Q5JUX0 258 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 OR5C1Q8NGR4 320 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 ZNF845Q96IR2 970 aaPredicted RBP13.48□□□□□ -0.25
HOXA3-202ENST00000396352 ABHD14BQ96IU4 210 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 SPIN2AQ99865 258 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 SPIN2BQ9BPZ2 258 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 SLC22A20A6NK97 555 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 LINC00587B1AMM8 73 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 FOLR3P41439 243 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 DEPPQ9NTK1 212 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 IL36RNQ9UBH0 155 aa13.48□□□□□ -0.25
HOXA3-202ENST00000396352 CYTIPO60759 359 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 TUSC2O75896 110 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 IGHV3-9P01782 118 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 NQO2P16083 231 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 ZFP36L1Q07352 338 aaKnown RBP13.47□□□□□ -0.25
HOXA3-202ENST00000396352 HEPN1Q6WQI6 88 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 OR56B2PQ8NGI1 322 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 GSN-AS1Q9NRJ2 163 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 PCSK5Q92824 1860 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 TK1P04183 234 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 S100A9P06702 114 aaKnown RBP13.47□□□□□ -0.25
HOXA3-202ENST00000396352 FABP1P07148 127 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 DYNLT3P51808 116 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 WDR5BQ86VZ2 330 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 C1QL4Q86Z23 238 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 SLC25A31Q9H0C2 315 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 TNRC6AQ8NDV7 1962 aaKnown RBP13.47□□□□□ -0.25
HOXA3-202ENST00000396352 IGKV1-6A0A0C4DH72 117 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 ZNF732B4DXR9 585 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 ZNHIT1O43257 154 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 OR2C1O95371 312 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 UCP1P25874 307 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 FGF12P61328 243 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 ID3Q02535 119 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 HAGHQ16775 308 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 PMS2CLQ68D20 193 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 KIAA1456Q9P272 454 aa13.47□□□□□ -0.25
HOXA3-202ENST00000396352 CLN5O75503 358 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 CST7O76096 145 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 PRDX4Q13162 271 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 SNIP1Q8TAD8 396 aaKnown RBP13.46□□□□□ -0.25
HOXA3-202ENST00000396352 TCEAL3Q969E4 200 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 MUCL1Q96DR8 90 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 REPIN1Q9BWE0 567 aaKnown RBP13.46□□□□□ -0.25
HOXA3-202ENST00000396352 DUXBA0A1W2PPF3 345 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 AP4M1O00189 453 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 HSD17B6O14756 317 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 TRAPPC6AO75865 159 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 HAAOP46952 286 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 RPS18P62269 152 aaKnown RBP13.46□□□□□ -0.25
HOXA3-202ENST00000396352 FOXO1Q12778 655 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 PPP1R32Q7Z5V6 425 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 TCEAL7Q9BRU2 100 aa13.46□□□□□ -0.25
HOXA3-202ENST00000396352 PINLYPA6NC86 204 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms