RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 MGST3O14880 152 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 ZNF780AO75290 641 aaPredicted RBP13.58□□□□□ -0.24
CXCL1-201ENST00000395761 ZNF182P17025 639 aaPredicted RBP13.58□□□□□ -0.24
CXCL1-201ENST00000395761 RBM11P57052 281 aaKnown RBP13.58□□□□□ -0.24
CXCL1-201ENST00000395761 SCAND1P57086 179 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 GPR176Q14439 515 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 IL13RA2Q14627 380 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 NHLRC3Q5JS37 347 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 RUSC1-AS1Q66K80 236 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 BRD3OSQ6XYD6 125 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 C1orf122Q6ZSJ8 110 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 C11orf42Q8N5U0 333 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 CHST4Q8NCG5 386 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 TMEM104Q8NE00 496 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 PPP1R35Q8TAP8 253 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 TNFRSF14Q92956 283 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 KCTD12Q96CX2 325 aaKnown RBP13.58□□□□□ -0.24
CXCL1-201ENST00000395761 BANF2Q9H503 90 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 PCDHB16Q9NRJ7 776 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 CCDC59Q9P031 241 aaKnown RBP13.58□□□□□ -0.24
CXCL1-201ENST00000395761 FBLN5Q9UBX5 448 aa13.58□□□□□ -0.24
CXCL1-201ENST00000395761 SMIM30A4D0T7 59 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 HSPB6O14558 160 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 GEMIN2O14893 280 aaKnown RBP13.57□□□□□ -0.24
CXCL1-201ENST00000395761 BPNT1O95861 308 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 SLC2A2P11168 524 aaPredicted RBP13.57□□□□□ -0.24
CXCL1-201ENST00000395761 GTF2F2P13984 249 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 SOX6P35712 828 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 DLX6P56179 175 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 QRFPP83859 136 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 AESQ08117 197 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 TAF9Q16594 264 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 HES5Q5TA89 166 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 GPR157Q5UAW9 335 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 TCF23Q7RTU1 214 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 BPIFB2Q8N4F0 458 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 FAM3DQ96BQ1 224 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 MS4A7Q9GZW8 240 aaPredicted RBP13.57□□□□□ -0.24
CXCL1-201ENST00000395761 ING3Q9NXR8 418 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 ABRACLQ9P1F3 81 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 DAPK2Q9UIK4 370 aa13.57□□□□□ -0.24
CXCL1-201ENST00000395761 LDLRAD4O15165 306 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 CRTAPO75718 401 aaPredicted RBP13.56□□□□□ -0.24
CXCL1-201ENST00000395761 ARSBP15848 533 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 PRTN3P24158 256 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 FPR2P25090 351 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 ERP29P30040 261 aaKnown RBP13.56□□□□□ -0.24
CXCL1-201ENST00000395761 GLIPR1P48060 266 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 P2RX3P56373 397 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 KLRD1Q13241 179 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 SCGB2A2Q13296 93 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 ATXN7L3Q14CW9 347 aaPredicted RBP13.56□□□□□ -0.24
CXCL1-201ENST00000395761 TUSC1Q2TAM9 212 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 C2orf76Q3KRA6 126 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 PAN3Q58A45 887 aaKnown RBP13.56□□□□□ -0.24
CXCL1-201ENST00000395761 IDNKQ5T6J7 187 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 OR10K2Q6IF99 312 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 BRICD5Q6PL45 260 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 OR51D1Q8NGF3 324 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 ACOT12Q8WYK0 555 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 FAM46BQ96A09 425 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 MRPS24Q96EL2 167 aaKnown RBP13.56□□□□□ -0.24
CXCL1-201ENST00000395761 COQ2Q96H96 371 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 ZNF48Q96MX3 618 aaPredicted RBP13.56□□□□□ -0.24
CXCL1-201ENST00000395761 KCNK15Q9H427 330 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 METTL8Q9H825 291 aaKnown RBP13.56□□□□□ -0.24
CXCL1-201ENST00000395761 LIN7BQ9HAP6 207 aa13.56□□□□□ -0.24
CXCL1-201ENST00000395761 IGHV1-69DA0A0B4J2H0 117 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 hADV38S2A0JD32 116 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 TMEM14DPA8MWL7 114 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 RNASEK-C17orf49H0YIS7 233 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 OR7C1O76099 320 aaPredicted RBP13.55□□□□□ -0.24
CXCL1-201ENST00000395761 IGHV1-69P01742 117 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 VSIG8P0DPA2 414 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 MGMTP16455 207 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 CLDN12P56749 244 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 MEF2CQ06413 473 aaPredicted RBP13.55□□□□□ -0.24
CXCL1-201ENST00000395761 P2RY14Q15391 338 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 HCP5Q6MZN7 132 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 C9orf139Q6ZV77 190 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 OR2W3Q7Z3T1 314 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 PNKDQ8N490 385 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 SIGLECL1Q8N7X8 197 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 SUMF2Q8NBJ7 301 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 KCNG3Q8TAE7 436 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 AP3S1Q92572 193 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 PTX4Q96A99 478 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 SELENOIQ9C0D9 397 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 SLIRPQ9GZT3 109 aaKnown RBP13.55□□□□□ -0.24
CXCL1-201ENST00000395761 NXF2Q9GZY0 626 aaKnown RBP13.55□□□□□ -0.24
CXCL1-201ENST00000395761 IFT22Q9H7X7 185 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 UNKLQ9H9P5 680 aaKnown RBP13.55□□□□□ -0.24
CXCL1-201ENST00000395761 SPATA2Q9UM82 520 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 A3GALT2U3KPV4 340 aa13.55□□□□□ -0.24
CXCL1-201ENST00000395761 A0A075B6Q4 140 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 MDFIC2A0A1B0GVS7 189 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 A0A1W2PPH5 198 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 A0A1W2PRD5 423 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 A0A1W2PRF3 423 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 A0A1W2PRM7 423 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms