RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TMEM14DPA8MWL7 114 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 CDPF1Q6NVV7 123 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 GAPTQ8N292 157 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 COMMD1Q8N668 190 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 IFI44Q8TCB0 444 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 CACFD1Q9UGQ2 172 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 UBE2L5PA0A1B0GUS4 154 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 HSPB2A8KAH6 182 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 EGR1P18146 543 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 CD200P41217 278 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 BAXQ07812 192 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 HSPB2Q16082 182 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 NSUN5P2Q63ZY6 315 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 FAHD2BQ6P2I3 314 aaPredicted RBP11.5□□□□□ -0.57
NFKB1-202ENST00000394820 C1orf87Q8N0U7 546 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 FAHD2AQ96GK7 314 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 C3orf85A0A1B0GTC6 90 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 FAM166BA8MTA8 275 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 GRPP07492 148 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 FAM157CP0CG43 387 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 RND3P61587 244 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 WIPI1Q5MNZ9 446 aaPredicted RBP11.5□□□□□ -0.57
NFKB1-202ENST00000394820 TBC1D26Q86UD7 250 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 ASB13Q8WXK3 278 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 MRGPRFQ96AM1 343 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 AQP10Q96PS8 301 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 TWSG1Q9GZX9 223 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 GCM1Q9NP62 436 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 PARP11Q9NR21 331 aa11.5□□□□□ -0.57
NFKB1-202ENST00000394820 FREM1Q5H8C1 2179 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 A0A1W2PNV4 684 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 NUDT19A8MXV4 375 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 H7BYZ3 331 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 EFNA2O43921 213 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 DEDDO75618 318 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 TRIM61Q5EBN2 209 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 DEGS2Q6QHC5 323 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 SPNS3Q6ZMD2 512 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 LINC00696Q6ZRV3 163 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 C17orf82Q86X59 251 aaPredicted RBP11.49□□□□□ -0.57
NFKB1-202ENST00000394820 RASL10BQ96S79 203 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 IGFBP3P17936 291 aaPredicted RBP11.49□□□□□ -0.57
NFKB1-202ENST00000394820 FSTP19883 344 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 EPHA8P29322 1005 aaPredicted RBP11.49□□□□□ -0.57
NFKB1-202ENST00000394820 SNCAP37840 140 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 RPL29P47914 159 aaKnown RBP11.49□□□□□ -0.57
NFKB1-202ENST00000394820 NPBWR2P48146 333 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 SSTP61278 116 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 NAAAQ02083 359 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 PLP2Q04941 152 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 PNLIPRP3Q17RR3 467 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 ZNF100Q8IYN0 542 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 CCDC54Q8NEL0 328 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 RFESDQ8TAC1 157 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 CARHSP1Q9Y2V2 147 aaKnown RBP11.49□□□□□ -0.57
NFKB1-202ENST00000394820 A0A1W2PQD3 144 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 PPP5D1E7EU14 171 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 SNRPCP09234 159 aaKnown RBP11.49□□□□□ -0.57
NFKB1-202ENST00000394820 ZNF816Q0VGE8 651 aaPredicted RBP11.49□□□□□ -0.57
NFKB1-202ENST00000394820 WFDC1Q9HC57 220 aa11.49□□□□□ -0.57
NFKB1-202ENST00000394820 NDUFA2O43678 99 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 MRPL33O75394 65 aaKnown RBP11.48□□□□□ -0.57
NFKB1-202ENST00000394820 IL2RAP01589 272 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 SCTP09683 121 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 IFI6P09912 130 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 ZNF133P52736 654 aaPredicted RBP11.48□□□□□ -0.57
NFKB1-202ENST00000394820 MST1LQ2TV78 715 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 RABEPKQ7Z6M1 372 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 ADPRHL1Q8NDY3 354 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 OR51M1Q9H341 326 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 EML5Q05BV3 1969 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 LIAT1Q6ZQX7 453 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 OR56B2PQ8NGI1 322 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 PACRGQ96M98 296 aaPredicted RBP11.48□□□□□ -0.57
NFKB1-202ENST00000394820 TP53RKQ96S44 253 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 FAM103A1Q9BTL3 118 aaKnown RBP11.48□□□□□ -0.57
NFKB1-202ENST00000394820 E9PLN8 166 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 H3F3AP84243 136 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 WDR74Q6RFH5 385 aaPredicted RBP11.48□□□□□ -0.57
NFKB1-202ENST00000394820 WDR5BQ86VZ2 330 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 CACNG5Q9UF02 275 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 OSGIN2Q9Y236 505 aa11.48□□□□□ -0.57
NFKB1-202ENST00000394820 FGF16O43320 207 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 EIF1BO60739 113 aaKnown RBP11.47□□□□□ -0.57
NFKB1-202ENST00000394820 TMEM127O75204 238 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 PPYP01298 95 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 DEFA4P12838 97 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 EIF1P41567 113 aaKnown RBP11.47□□□□□ -0.57
NFKB1-202ENST00000394820 RPS19BP1Q86WX3 136 aaKnown RBP11.47□□□□□ -0.57
NFKB1-202ENST00000394820 FAM185AQ8N0U4 392 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 MRGPRX4Q96LA9 322 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 DUSP23Q9BVJ7 150 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 ZDHHC8Q9ULC8 765 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 USF3Q68DE3 2245 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 ZNF732B4DXR9 585 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 NPIPB7O75200 414 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 CTSDP07339 412 aaPredicted RBP11.47□□□□□ -0.57
NFKB1-202ENST00000394820 CCL3P10147 92 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 CLN3Q13286 438 aa11.47□□□□□ -0.57
NFKB1-202ENST00000394820 PMS2P11Q13670 270 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms