RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 GFOD1Q9NXC2 390 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 FER1L5A0AVI2 2057 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 NPIPB13A6NJU9 1138 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 NPIPB4C9JG80 1138 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 H0YL77 283 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 UBE2NP61088 152 aaKnown RBP14.01□□□□□ -0.17
PCDH1-203ENST00000394536 PMP22Q01453 160 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 C5orf24Q7Z6I8 188 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 TVP23CQ96ET8 276 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 FAM234AQ9H0X4 552 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 BCL3P20749 454 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 HBG1P69891 147 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 HBG2P69892 147 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 ZXDAP98168 799 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 PNPLA5Q7Z6Z6 429 aaPredicted RBP14□□□□□ -0.17
PCDH1-203ENST00000394536 ZNF251Q9BRH9 671 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 DLK1P80370 383 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 DCAF12Q5T6F0 453 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 CST9LP1Q5W188 147 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 SPINK14Q6IE38 97 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 CYB561D1Q8N8Q1 229 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 TP53RKQ96S44 253 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 ABHD14AQ9BUJ0 271 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 SMOC1Q9H4F8 434 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 CDH20Q9HBT6 801 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 FABP4P15090 132 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 TMEM252Q8N6L7 170 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 APH1AQ96BI3 265 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 OBP2BQ9NPH6 170 aa14□□□□□ -0.17
PCDH1-203ENST00000394536 DBX1A6NMT0 343 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 PATE3B3GLJ2 98 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 KRASP01116 189 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 DTYMKP23919 212 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 TMEM38BQ9NVV0 291 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 PLA2G3Q9NZ20 509 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 PSENENQ9NZ42 101 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 DOCK10Q96BY6 2186 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 TMEM187Q14656 261 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 ZNF528Q3MIS6 628 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 ZNF343Q6P1L6 599 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 ZNF610Q8N9Z0 462 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 CACNG5Q9UF02 275 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 DANCRP0C864 163 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 TDHQ8IZJ6 230 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 NUDT16L1Q9BRJ7 211 aaKnown RBP13.99□□□□□ -0.17
PCDH1-203ENST00000394536 PRO1933Q9H354 126 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 GPR27Q9NS67 375 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 NBASA2RRP1 2371 aa13.99□□□□□ -0.17
PCDH1-203ENST00000394536 BAXQ07812 192 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 CLN3Q13286 438 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 MRPL49Q13405 166 aaKnown RBP13.98□□□□□ -0.17
PCDH1-203ENST00000394536 HLA-CQ95604 372 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 NTNG2Q96CW9 530 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 RAB39BQ96DA2 213 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 SRXN1Q9BYN0 137 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 OR2H1Q9GZK4 316 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 TMPRSS5Q9H3S3 457 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 TICRRQ7Z2Z1 1910 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 TRBV6-7A0A0A0MS04 114 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 LINC00587B1AMM8 73 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 ACAA1P09110 424 aaPredicted RBP13.98□□□□□ -0.17
PCDH1-203ENST00000394536 BMP5P22003 454 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 CA6P23280 308 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 FIP1L1Q6UN15 594 aaKnown RBP13.98□□□□□ -0.17
PCDH1-203ENST00000394536 BTNL8Q6UX41 500 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 C1orf87Q8N0U7 546 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 HPSE2Q8WWQ2 592 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 SMIM7Q9BQ49 75 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 UFSP2Q9NUQ7 469 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 IGLV3-19P01714 112 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 SMIM6P0DI80 62 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 ZNF17P17021 662 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 ACER2Q5QJU3 275 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 LHFPL1Q86WI0 220 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 OR1K1Q8NGR3 316 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 MARS2Q96GW9 593 aaKnown RBP13.98□□□□□ -0.17
PCDH1-203ENST00000394536 CHRNA10Q9GZZ6 450 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 TMEM100Q9NV29 134 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 FBLN5Q9UBX5 448 aa13.98□□□□□ -0.17
PCDH1-203ENST00000394536 NUP210Q8TEM1 1887 aaPredicted RBP13.97□□□□□ -0.17
PCDH1-203ENST00000394536 VDAC1P21796 283 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 ANOS1P23352 680 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 CHCHD2Q9Y6H1 151 aaPredicted RBP13.97□□□□□ -0.17
PCDH1-203ENST00000394536 CHD9Q3L8U1 2897 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 PHOX2AO14813 284 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 SOX15O60248 233 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 MPZP25189 248 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 C3AR1Q16581 482 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 MST1LQ2TV78 715 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 FAM209BQ5JX69 171 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 ZNF468Q5VIY5 522 aaPredicted RBP13.97□□□□□ -0.17
PCDH1-203ENST00000394536 CALHM1Q8IU99 346 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 STRADBQ9C0K7 418 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 COLCA2A8K830 154 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 TSTD3H0UI37 97 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 ATXN7O15265 892 aaPredicted RBP13.97□□□□□ -0.17
PCDH1-203ENST00000394536 CTXN2P0C2S0 81 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 CD200P41217 278 aa13.97□□□□□ -0.17
PCDH1-203ENST00000394536 RBM11P57052 281 aaKnown RBP13.97□□□□□ -0.17
PCDH1-203ENST00000394536 ARG2P78540 354 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms