RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 GLB1P16278 677 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 ZP4Q12836 540 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 SSX7Q7RTT5 188 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 TMEM171Q8WVE6 324 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 ZCCHC14Q8WYQ9 949 aaKnown RBP16.35■□□□□ 0.21
HOXC6-202ENST00000394331 MSI2Q96DH6 328 aaKnown RBP16.35■□□□□ 0.21
HOXC6-202ENST00000394331 PBOV1Q9GZY1 135 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 FGF21Q9NSA1 209 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 PCDH15Q96QU1 1955 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 A0A1W2PN81 502 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 ATXN7O15265 892 aaPredicted RBP16.35■□□□□ 0.21
HOXC6-202ENST00000394331 CHRNA7P36544 502 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 KCNMB1Q16558 191 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 CPEB3Q8NE35 698 aaKnown RBP16.35■□□□□ 0.21
HOXC6-202ENST00000394331 MOB1AQ9H8S9 216 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 RFNGQ9Y644 331 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 SEC16AO15027 2179 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 ZNF878C9JN71 531 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 DAP3P51398 398 aaKnown RBP16.35■□□□□ 0.21
HOXC6-202ENST00000394331 LEMD1Q68G75 181 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 CYP2G1PQ6ZSU1 146 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 ZNF501Q96CX3 271 aaPredicted RBP16.35■□□□□ 0.21
HOXC6-202ENST00000394331 OR5B12Q96R08 314 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 SLC7A11Q9UPY5 501 aa16.35■□□□□ 0.21
HOXC6-202ENST00000394331 ANKUB1A6NFN9 424 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 NPIPA5E9PKD4 350 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 C17orf67Q0P5P2 114 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 C16orf82Q7Z2V1 217 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 ZNF100Q8IYN0 542 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 RNASE8Q8TDE3 154 aaKnown RBP16.34■□□□□ 0.21
HOXC6-202ENST00000394331 RTN4IP1Q8WWV3 396 aaPredicted RBP16.34■□□□□ 0.21
HOXC6-202ENST00000394331 ZPBPQ9BS86 351 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 TM2D1Q9BX74 207 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 NPIPA1Q9UND3 350 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 ALPK2Q86TB3 2170 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 COL5A1P20908 1838 aaPredicted RBP16.34■□□□□ 0.21
HOXC6-202ENST00000394331 NPIPB13A6NJU9 1138 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 NPIPB4C9JG80 1138 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 HRASP01112 189 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 MMP9P14780 707 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 CNN1P51911 297 aaKnown RBP16.34■□□□□ 0.21
HOXC6-202ENST00000394331 UBE2NP61088 152 aaKnown RBP16.34■□□□□ 0.21
HOXC6-202ENST00000394331 IL24Q13007 206 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 WDR25Q64LD2 544 aaPredicted RBP16.34■□□□□ 0.21
HOXC6-202ENST00000394331 PHF7Q9BWX1 381 aaPredicted RBP16.34■□□□□ 0.21
HOXC6-202ENST00000394331 GNG13Q9P2W3 67 aa16.34■□□□□ 0.21
HOXC6-202ENST00000394331 SZT2Q5T011 3432 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 FAM24AA6NFZ4 105 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 YPEL1O60688 119 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 MPZL1O95297 269 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 GZMHP20718 246 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 SUMO3P55854 103 aaPredicted RBP16.33■□□□□ 0.21
HOXC6-202ENST00000394331 KLF3P57682 345 aaPredicted RBP16.33■□□□□ 0.21
HOXC6-202ENST00000394331 TAS2R30P59541 319 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 KLHL24Q6TFL4 600 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 H1FNTQ75WM6 255 aaPredicted RBP16.33■□□□□ 0.21
HOXC6-202ENST00000394331 OR51T1Q8NGJ9 327 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 ASB10Q8WXI3 467 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 YPEL2Q96QA6 119 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 TBX15Q96SF7 602 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 OR6C3Q9NZP0 311 aa16.33■□□□□ 0.21
HOXC6-202ENST00000394331 MS4A18H0YCH9 400 aa16.33■□□□□ 0.2
HOXC6-202ENST00000394331 HLA-DOBP13765 273 aa16.33■□□□□ 0.2
HOXC6-202ENST00000394331 GALR1P47211 349 aa16.33■□□□□ 0.2
HOXC6-202ENST00000394331 RAB7AP51149 207 aa16.33■□□□□ 0.2
HOXC6-202ENST00000394331 MS4A18Q3C1V0 323 aa16.33■□□□□ 0.2
HOXC6-202ENST00000394331 RNF144BQ7Z419 303 aa16.33■□□□□ 0.2
HOXC6-202ENST00000394331 ORAOV1Q8WV07 137 aa16.33■□□□□ 0.2
HOXC6-202ENST00000394331 FOXQ1Q9C009 403 aa16.33■□□□□ 0.2
HOXC6-202ENST00000394331 MRPS17Q9Y2R5 130 aaKnown RBP16.33■□□□□ 0.2
HOXC6-202ENST00000394331 ZNF92Q03936 586 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 ABCA11PQ4W5N1 156 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 WDR74Q6RFH5 385 aaPredicted RBP16.32■□□□□ 0.2
HOXC6-202ENST00000394331 P4HA3Q7Z4N8 544 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 C11orf42Q8N5U0 333 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 TMEM252Q8N6L7 170 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 MBD3L1Q8WWY6 194 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 PLK3Q9H4B4 646 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 A0A1W2PP11 408 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 FAM221AA4D161 298 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 NKX6-3A6NJ46 265 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 CD55P08174 381 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 ZNF728P0DKX0 622 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 EPHA8P29322 1005 aaPredicted RBP16.32■□□□□ 0.2
HOXC6-202ENST00000394331 GNB2P62879 340 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 TMEM183BQ1AE95 376 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 SHISA6Q6ZSJ9 500 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 ANXA10Q9UJ72 324 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 C20orf202A1L168 122 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 MAP1LC3B2A6NCE7 125 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 A8MXE2 369 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 SRP14P37108 136 aaKnown RBP16.32■□□□□ 0.2
HOXC6-202ENST00000394331 ASCL1P50553 236 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 GABREP78334 506 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 SMAD4Q13485 552 aaKnown RBP16.32■□□□□ 0.2
HOXC6-202ENST00000394331 TMEM123Q8N131 208 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 MS4A10Q96PG2 267 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 MAP1LC3BQ9GZQ8 125 aa16.32■□□□□ 0.2
HOXC6-202ENST00000394331 RBKSQ9H477 322 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms