RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 SDCBPO00560 298 aaPredicted RBP17.03■□□□□ 0.32
HDDC3-202ENST00000394272 ARPC4P59998 168 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 GRK1Q15835 563 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 ZNF497Q6ZNH5 498 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 LHFPL1Q86WI0 220 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 TGIF2LYQ8IUE0 185 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 CD177Q8N6Q3 437 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 BOLLQ8N9W6 283 aaKnown RBP17.03■□□□□ 0.32
HDDC3-202ENST00000394272 OR5T2Q8NGG2 359 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 DECR2Q9NUI1 292 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 DNAJB11Q9UBS4 358 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 METRNQ9UJH8 293 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 MYO18BQ8IUG5 2567 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 A0A0A6YYJ9 748 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 POM121CA8CG34 1229 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 CYB5R3P00387 301 aaPredicted RBP17.03■□□□□ 0.32
HDDC3-202ENST00000394272 TFF1P04155 84 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 PRDX2P32119 198 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 COL10A1Q03692 680 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 FAM201AQ5SY85 155 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 TERB2Q8NHR7 220 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 GHITMQ9H3K2 345 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 ZNF222Q9UK12 451 aa17.03■□□□□ 0.32
HDDC3-202ENST00000394272 TMEM82A0PJX8 343 aa17.02■□□□□ 0.32
HDDC3-202ENST00000394272 RNF224P0DH78 156 aa17.02■□□□□ 0.32
HDDC3-202ENST00000394272 ANXA7P20073 488 aaKnown RBP17.02■□□□□ 0.32
HDDC3-202ENST00000394272 TSPAN5P62079 268 aa17.02■□□□□ 0.32
HDDC3-202ENST00000394272 SNRPD2P62316 118 aaKnown RBP17.02■□□□□ 0.32
HDDC3-202ENST00000394272 ATXN7L3Q14CW9 347 aaPredicted RBP17.02■□□□□ 0.32
HDDC3-202ENST00000394272 C17orf107Q6ZR85 190 aa17.02■□□□□ 0.32
HDDC3-202ENST00000394272 HPS1Q92902 700 aa17.02■□□□□ 0.32
HDDC3-202ENST00000394272 BEX2Q9BXY8 128 aa17.02■□□□□ 0.32
HDDC3-202ENST00000394272 BEX1Q9HBH7 125 aa17.02■□□□□ 0.32
HDDC3-202ENST00000394272 DCAF16Q9NXF7 216 aa17.02■□□□□ 0.32
HDDC3-202ENST00000394272 IGHV3OR15-7A0A075B7D8 119 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 CEACAM18A8MTB9 384 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 PRAF2O60831 178 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 ZNF737O75373 536 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 GSTT2P0CG29 244 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 IRF2P14316 349 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 CD80P33681 288 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 ATPAF1Q5TC12 328 aaPredicted RBP17.01■□□□□ 0.31
HDDC3-202ENST00000394272 ZNF660Q6AZW8 331 aaPredicted RBP17.01■□□□□ 0.31
HDDC3-202ENST00000394272 TMEM17Q86X19 198 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 ANGPTL6Q8NI99 470 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 SHARPINQ9H0F6 387 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 NECAP2Q9NVZ3 263 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 VSIG4Q9Y279 399 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 A0A1W2PPR1 153 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 H7C1Q1 480 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 OR5H8P0DN80 308 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 OR3A1P47881 315 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 KCNJ3P48549 501 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 AADACL3Q5VUY0 350 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 SLC36A1Q7Z2H8 476 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 ZDHHC22Q8N966 263 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 KIAA2026Q5HYC2 2103 aa17.01■□□□□ 0.31
HDDC3-202ENST00000394272 KIR2DS1A0A191URI9 304 aa17■□□□□ 0.31
HDDC3-202ENST00000394272 RLN1P04808 185 aa17■□□□□ 0.31
HDDC3-202ENST00000394272 IL5P05113 134 aa17■□□□□ 0.31
HDDC3-202ENST00000394272 VSIG10L2P0DP72 767 aa17■□□□□ 0.31
HDDC3-202ENST00000394272 KIR2DS4P43632 304 aa17■□□□□ 0.31
HDDC3-202ENST00000394272 PPOXP50336 477 aa17■□□□□ 0.31
HDDC3-202ENST00000394272 KIR2DS1Q14954 304 aa17■□□□□ 0.31
HDDC3-202ENST00000394272 TEX36Q5VZQ5 186 aa17■□□□□ 0.31
HDDC3-202ENST00000394272 GLDNQ6ZMI3 551 aaPredicted RBP17■□□□□ 0.31
HDDC3-202ENST00000394272 ALX4Q9H161 411 aaPredicted RBP17■□□□□ 0.31
HDDC3-202ENST00000394272 LIME1Q9H400 295 aa17■□□□□ 0.31
HDDC3-202ENST00000394272 ZNF221Q9UK13 617 aa17■□□□□ 0.31
HDDC3-202ENST00000394272 RAI1Q7Z5J4 1906 aaPredicted RBP17■□□□□ 0.31
HDDC3-202ENST00000394272 SPTAN1Q13813 2472 aaKnown RBP17■□□□□ 0.31
HDDC3-202ENST00000394272 LRBAP50851 2863 aa17■□□□□ 0.31
HDDC3-202ENST00000394272 HMX3A6NHT5 357 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 LRRC30A6NM36 301 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 TRDCB7Z8K6 153 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 TRAPPC2P0DI81 140 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 TRAPPC2BP0DI82 140 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 RCC1P18754 421 aaPredicted RBP16.99■□□□□ 0.31
HDDC3-202ENST00000394272 PAX5Q02548 391 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 STUMQ69YW2 141 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 DHRS11Q6UWP2 260 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 OR6F1Q8NGZ6 308 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 MED30Q96HR3 178 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 COL12A1Q99715 3063 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 CBLN4Q9NTU7 201 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 MBNL3Q9NUK0 354 aaKnown RBP16.99■□□□□ 0.31
HDDC3-202ENST00000394272 FABP7O15540 132 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 HPXP02790 462 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 SCTP09683 121 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 MUC1P15941 1255 aaPredicted RBP16.99■□□□□ 0.31
HDDC3-202ENST00000394272 SLC35E4Q6ICL7 350 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 C11orf71Q6IPW1 123 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 MOB1BQ7L9L4 216 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 COQ2Q96H96 371 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 MYOZ1Q9NP98 299 aaPredicted RBP16.99■□□□□ 0.31
HDDC3-202ENST00000394272 ING3Q9NXR8 418 aa16.99■□□□□ 0.31
HDDC3-202ENST00000394272 OOEPA6NGQ2 149 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 OR5H14A6NHG9 310 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 TMEM178BH3BS89 294 aa16.98■□□□□ 0.31
HDDC3-202ENST00000394272 ZNF205O95201 554 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms