RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 NUFIP2Q7Z417 695 aaKnown RBP16.81■□□□□ 0.28
RCCD1-201ENST00000394258 APH1AQ96BI3 265 aa16.81■□□□□ 0.28
RCCD1-201ENST00000394258 AKR1E2Q96JD6 320 aa16.81■□□□□ 0.28
RCCD1-201ENST00000394258 RPS10P5Q9NQ39 176 aa16.81■□□□□ 0.28
RCCD1-201ENST00000394258 C1orf196B1AJZ1 125 aa16.8■□□□□ 0.28
RCCD1-201ENST00000394258 ZNF732B4DXR9 585 aa16.8■□□□□ 0.28
RCCD1-201ENST00000394258 CD59P13987 128 aa16.8■□□□□ 0.28
RCCD1-201ENST00000394258 KRBOX4Q5JUW0 171 aa16.8■□□□□ 0.28
RCCD1-201ENST00000394258 NEK7Q8TDX7 302 aa16.8■□□□□ 0.28
RCCD1-201ENST00000394258 ZNF552Q9H707 407 aaPredicted RBP16.8■□□□□ 0.28
RCCD1-201ENST00000394258 ABI3Q9P2A4 366 aa16.8■□□□□ 0.28
RCCD1-201ENST00000394258 C1QL1O75973 258 aa16.8■□□□□ 0.28
RCCD1-201ENST00000394258 SP9P0CG40 484 aa16.8■□□□□ 0.28
RCCD1-201ENST00000394258 NQO2P16083 231 aa16.8■□□□□ 0.28
RCCD1-201ENST00000394258 MSI2Q96DH6 328 aaKnown RBP16.8■□□□□ 0.28
RCCD1-201ENST00000394258 ZNF488Q96MN9 340 aa16.8■□□□□ 0.28
RCCD1-201ENST00000394258 TP53RKQ96S44 253 aa16.8■□□□□ 0.28
RCCD1-201ENST00000394258 NUDT19A8MXV4 375 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 NME2P1O60361 137 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 ZNF883P0CG24 379 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 NHLH2Q02577 135 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 TSC22D1Q15714 1073 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 EIF5AL1Q6IS14 154 aaKnown RBP16.79■□□□□ 0.28
RCCD1-201ENST00000394258 LIAT1Q6ZQX7 453 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 MOB3AQ96BX8 217 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 C18orf12Q96KH6 178 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 MTCH1Q9NZJ7 389 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 LILRA1O75019 489 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 JTBO76095 146 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 PPYP01298 95 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 SCTP09683 121 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 EIF5AP63241 154 aaKnown RBP16.79■□□□□ 0.28
RCCD1-201ENST00000394258 SPIN3Q5JUX0 258 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 HIST1H2BAQ96A08 127 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 GALNT14Q96FL9 552 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 DEFB127Q9H1M4 99 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 SH3BGRL3Q9H299 93 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 LIPGQ9Y5X9 500 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 RFNGQ9Y644 331 aa16.79■□□□□ 0.28
RCCD1-201ENST00000394258 A6NLC8 198 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 SYNGR1O43759 233 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 SNRNP70P08621 437 aaKnown RBP16.78■□□□□ 0.28
RCCD1-201ENST00000394258 SMIM6P0DI80 62 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 OR2B8PP59922 312 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 HIKESHIQ53FT3 197 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 TMEM211Q6ICI0 200 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 MCEMP1Q8IX19 187 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 SECTM1Q8WVN6 248 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 GPR87Q9BY21 358 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 LINC00470Q9BZP3 86 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 PRSS50Q9UI38 385 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 A0A1B0GV50 99 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 CDX4O14627 284 aaPredicted RBP16.78■□□□□ 0.28
RCCD1-201ENST00000394258 MT-CO3P00414 261 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 MEOX1P50221 254 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 ZDHHC23Q8IYP9 409 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 SYT3Q9BQG1 590 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 ESPL1Q14674 2120 aa16.78■□□□□ 0.28
RCCD1-201ENST00000394258 hCG_1809904A0A1W2PP81 198 aa16.77■□□□□ 0.28
RCCD1-201ENST00000394258 A0A1W2PR64 198 aa16.77■□□□□ 0.28
RCCD1-201ENST00000394258 A0A1W2PRV1 198 aa16.77■□□□□ 0.28
RCCD1-201ENST00000394258 TNFSF15O95150 251 aa16.77■□□□□ 0.28
RCCD1-201ENST00000394258 C9orf152Q5JTZ5 239 aa16.77■□□□□ 0.28
RCCD1-201ENST00000394258 FBXW12Q6X9E4 464 aa16.77■□□□□ 0.28
RCCD1-201ENST00000394258 SLC35G3Q8N808 338 aa16.77■□□□□ 0.28
RCCD1-201ENST00000394258 IP6K3Q96PC2 410 aa16.77■□□□□ 0.28
RCCD1-201ENST00000394258 TECTBQ96PL2 329 aa16.77■□□□□ 0.28
RCCD1-201ENST00000394258 E5RGE8 158 aa16.77■□□□□ 0.27
RCCD1-201ENST00000394258 H7C1Q1 480 aa16.77■□□□□ 0.27
RCCD1-201ENST00000394258 CD5P06127 495 aa16.77■□□□□ 0.27
RCCD1-201ENST00000394258 ZNF14P17017 642 aaPredicted RBP16.77■□□□□ 0.27
RCCD1-201ENST00000394258 NRN1LQ496H8 165 aa16.77■□□□□ 0.27
RCCD1-201ENST00000394258 FAM76BQ5HYJ3 339 aa16.77■□□□□ 0.27
RCCD1-201ENST00000394258 SUMF1Q8NBK3 374 aa16.77■□□□□ 0.27
RCCD1-201ENST00000394258 APOBEC3DQ96AK3 386 aaPredicted RBP16.77■□□□□ 0.27
RCCD1-201ENST00000394258 SUCNR1Q9BXA5 334 aa16.77■□□□□ 0.27
RCCD1-201ENST00000394258 NSG2Q9Y328 171 aa16.77■□□□□ 0.27
RCCD1-201ENST00000394258 EP300Q09472 2414 aaPredicted RBP16.77■□□□□ 0.27
RCCD1-201ENST00000394258 FAM157AC9JC47 383 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 RPL36A-HNRNPH2H7BZ11 118 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 GAPDHP04406 335 aaKnown RBP16.76■□□□□ 0.27
RCCD1-201ENST00000394258 HEXAP06865 529 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 ZNF616Q08AN1 781 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 SPATA46Q5T0L3 261 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.76■□□□□ 0.27
RCCD1-201ENST00000394258 LGI3Q8N145 548 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 IL22RA1Q8N6P7 574 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 KIRREL1Q96J84 757 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 PARP11Q9NR21 331 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 SMCO4Q9NRQ5 59 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 RCL1Q9Y2P8 373 aaKnown RBP16.76■□□□□ 0.27
RCCD1-201ENST00000394258 SLC33A1O00400 549 aaPredicted RBP16.76■□□□□ 0.27
RCCD1-201ENST00000394258 GNRHRP30968 328 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 CEACAM21Q3KPI0 293 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 NCMAPQ5T1S8 102 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 HSD17B11Q8NBQ5 300 aa16.76■□□□□ 0.27
RCCD1-201ENST00000394258 C21orf140B9A014 251 aa16.75■□□□□ 0.27
RCCD1-201ENST00000394258 HS3ST1O14792 307 aa16.75■□□□□ 0.27
RCCD1-201ENST00000394258 LY86O95711 162 aa16.75■□□□□ 0.27
RCCD1-201ENST00000394258 SP1P08047 785 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms