RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 SNAPC3Q92966 411 aa19.44■□□□□ 0.7
CNN3-202ENST00000394202 CCL19Q99731 98 aa19.44■□□□□ 0.7
CNN3-202ENST00000394202 C11orf54Q9H0W9 315 aaPredicted RBP19.44■□□□□ 0.7
CNN3-202ENST00000394202 HLA-DMAP28067 261 aa19.43■□□□□ 0.7
CNN3-202ENST00000394202 OR3A1P47881 315 aa19.43■□□□□ 0.7
CNN3-202ENST00000394202 DEFA1P59665 94 aa19.43■□□□□ 0.7
CNN3-202ENST00000394202 DEFA3P59666 94 aa19.43■□□□□ 0.7
CNN3-202ENST00000394202 FAAP20Q6NZ36 180 aa19.43■□□□□ 0.7
CNN3-202ENST00000394202 C5orf24Q7Z6I8 188 aa19.43■□□□□ 0.7
CNN3-202ENST00000394202 TMEM165Q9HC07 324 aa19.43■□□□□ 0.7
CNN3-202ENST00000394202 ZNF701Q9NV72 531 aaPredicted RBP19.43■□□□□ 0.7
CNN3-202ENST00000394202 F12P00748 615 aaPredicted RBP19.43■□□□□ 0.7
CNN3-202ENST00000394202 OR4D10Q8NGI6 311 aa19.43■□□□□ 0.7
CNN3-202ENST00000394202 C14orf79Q96F83 325 aa19.43■□□□□ 0.7
CNN3-202ENST00000394202 PAIP2BQ9ULR5 123 aaKnown RBP19.43■□□□□ 0.7
CNN3-202ENST00000394202 NAPSAO96009 420 aa19.42■□□□□ 0.7
CNN3-202ENST00000394202 CD3DP04234 171 aa19.42■□□□□ 0.7
CNN3-202ENST00000394202 GLAP06280 429 aa19.42■□□□□ 0.7
CNN3-202ENST00000394202 FCGR3AP08637 254 aa19.42■□□□□ 0.7
CNN3-202ENST00000394202 GAFA1Q96PS6 74 aa19.42■□□□□ 0.7
CNN3-202ENST00000394202 C12orf4Q9NQ89 552 aa19.42■□□□□ 0.7
CNN3-202ENST00000394202 IFT46Q9NQC8 304 aa19.42■□□□□ 0.7
CNN3-202ENST00000394202 DLL4Q9NR61 685 aa19.42■□□□□ 0.7
CNN3-202ENST00000394202 ANAPC10Q9UM13 185 aa19.42■□□□□ 0.7
CNN3-202ENST00000394202 TRAV38-1A0A0B4J264 116 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 H3BUI4 141 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 TNFRSF13BO14836 293 aaPredicted RBP19.41■□□□□ 0.7
CNN3-202ENST00000394202 AESQ08117 197 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 ASAH1Q13510 395 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 RBM39Q14498 530 aaKnown RBP19.41■□□□□ 0.7
CNN3-202ENST00000394202 LYPD2Q6UXB3 125 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 ZNF788Q6ZQV5 615 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 FGFRL1Q8N441 504 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 FAM216BQ8N7L0 139 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 SDSLQ96GA7 329 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 SEBOXQ9HB31 216 aaPredicted RBP19.41■□□□□ 0.7
CNN3-202ENST00000394202 TRAV39A0A0B4J263 110 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 EIF2B2P49770 351 aaKnown RBP19.41■□□□□ 0.7
CNN3-202ENST00000394202 EFNA4P52798 201 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 ACTBP60709 375 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 BTG1P62324 171 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 ACTG1P63261 375 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 MRPS11P82912 194 aaKnown RBP19.41■□□□□ 0.7
CNN3-202ENST00000394202 AVPI1Q5T686 147 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 OR4K15Q8NH41 348 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 TMEM246Q9BRR3 403 aa19.41■□□□□ 0.7
CNN3-202ENST00000394202 MAP1AP78559 2803 aaPredicted RBP19.4■□□□□ 0.7
CNN3-202ENST00000394202 APCP25054 2843 aa19.4■□□□□ 0.7
CNN3-202ENST00000394202 FCN3O75636 299 aa19.4■□□□□ 0.7
CNN3-202ENST00000394202 MT-ND4P03905 459 aa19.4■□□□□ 0.7
CNN3-202ENST00000394202 RFX2P48378 723 aa19.4■□□□□ 0.7
CNN3-202ENST00000394202 MRPS15P82914 257 aaKnown RBP19.4■□□□□ 0.7
CNN3-202ENST00000394202 SSBP1Q04837 148 aaKnown RBP19.4■□□□□ 0.7
CNN3-202ENST00000394202 ZNF497Q6ZNH5 498 aa19.4■□□□□ 0.7
CNN3-202ENST00000394202 HOGA1Q86XE5 327 aa19.4■□□□□ 0.7
CNN3-202ENST00000394202 TPRX1Q8N7U7 411 aa19.4■□□□□ 0.7
CNN3-202ENST00000394202 MRPL30Q8TCC3 161 aaKnown RBP19.4■□□□□ 0.7
CNN3-202ENST00000394202 COQ2Q96H96 371 aa19.4■□□□□ 0.7
CNN3-202ENST00000394202 M0QYG6 137 aa19.39■□□□□ 0.7
CNN3-202ENST00000394202 NAT1P18440 290 aa19.39■□□□□ 0.7
CNN3-202ENST00000394202 RCVRNP35243 200 aa19.39■□□□□ 0.7
CNN3-202ENST00000394202 GRK1Q15835 563 aa19.39■□□□□ 0.7
CNN3-202ENST00000394202 ZNF787Q6DD87 383 aa19.39■□□□□ 0.7
CNN3-202ENST00000394202 BEST4Q8NFU0 473 aa19.39■□□□□ 0.7
CNN3-202ENST00000394202 MARVELD3Q96A59 401 aa19.39■□□□□ 0.7
CNN3-202ENST00000394202 CHMP1AQ9HD42 196 aaPredicted RBP19.39■□□□□ 0.7
CNN3-202ENST00000394202 HRASLSQ9HDD0 168 aa19.39■□□□□ 0.7
CNN3-202ENST00000394202 ARID1AO14497 2285 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 K7N7A8 449 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 TMPRSS2O15393 492 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 LYRM1O43325 122 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 IGHV4-39P01824 125 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 CSF1P09603 554 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 GSTT2BP0CG30 244 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 RCC1P18754 421 aaPredicted RBP19.39■□□□□ 0.69
CNN3-202ENST00000394202 DTYMKP23919 212 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 ATPAF1Q5TC12 328 aaPredicted RBP19.39■□□□□ 0.69
CNN3-202ENST00000394202 RSBN1Q5VWQ0 802 aaPredicted RBP19.39■□□□□ 0.69
CNN3-202ENST00000394202 SHEQ5VZ18 495 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 GDPD3Q7L5L3 318 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 TMEM229BQ8NBD8 167 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 CCDC107Q8WV48 283 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 SNX22Q96L94 193 aa19.39■□□□□ 0.69
CNN3-202ENST00000394202 MEX3AA1L020 520 aaKnown RBP19.38■□□□□ 0.69
CNN3-202ENST00000394202 ECDO95905 644 aaPredicted RBP19.38■□□□□ 0.69
CNN3-202ENST00000394202 IGHV2-70P01814 119 aa19.38■□□□□ 0.69
CNN3-202ENST00000394202 TK1P04183 234 aa19.38■□□□□ 0.69
CNN3-202ENST00000394202 BTCP35070 178 aa19.38■□□□□ 0.69
CNN3-202ENST00000394202 CBX5P45973 191 aa19.38■□□□□ 0.69
CNN3-202ENST00000394202 CD300CQ08708 224 aa19.38■□□□□ 0.69
CNN3-202ENST00000394202 CARTPTQ16568 116 aa19.38■□□□□ 0.69
CNN3-202ENST00000394202 GAPTQ8N292 157 aa19.38■□□□□ 0.69
CNN3-202ENST00000394202 ZNF561Q8N587 486 aa19.38■□□□□ 0.69
CNN3-202ENST00000394202 OR4C16Q8NGL9 310 aa19.38■□□□□ 0.69
CNN3-202ENST00000394202 SETD6Q8TBK2 473 aa19.38■□□□□ 0.69
CNN3-202ENST00000394202 TINAGL1Q9GZM7 467 aaPredicted RBP19.38■□□□□ 0.69
CNN3-202ENST00000394202 ZNF665Q9H7R5 613 aa19.38■□□□□ 0.69
CNN3-202ENST00000394202 ZNF736B4DX44 427 aaPredicted RBP19.37■□□□□ 0.69
CNN3-202ENST00000394202 SPNP16150 400 aa19.37■□□□□ 0.69
CNN3-202ENST00000394202 HRH1P35367 487 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms