RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 TMEM183BQ1AE95 376 aa18.91■□□□□ 0.62
CLDND1-202ENST00000394180 ZNF100Q8IYN0 542 aa18.91■□□□□ 0.62
CLDND1-202ENST00000394180 RBKSQ9H477 322 aa18.91■□□□□ 0.62
CLDND1-202ENST00000394180 FAM24AA6NFZ4 105 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 NKX6-3A6NJ46 265 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 PAFAH1B2P68402 229 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 KCNMB1Q16558 191 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 C16orf82Q7Z2V1 217 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 OR2V1Q8NHB1 315 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 TMEM171Q8WVE6 324 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 KCNE4Q8WWG9 221 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 MS4A10Q96PG2 267 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 PRSS50Q9UI38 385 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 MRPS2Q9Y399 296 aaKnown RBP18.9■□□□□ 0.62
CLDND1-202ENST00000394180 DUXBA0A1W2PPF3 345 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 C20orf202A1L168 122 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 H0YGG7 62 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 H7BYZ3 331 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 YPEL1O60688 119 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 IL33O95760 270 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 DTYMKP23919 212 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 ARF3P61204 181 aaPredicted RBP18.9■□□□□ 0.62
CLDND1-202ENST00000394180 SLC38A9Q8NBW4 561 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 OR2D3Q8NGH3 330 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 MRGPRDQ8TDS7 321 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 YPEL2Q96QA6 119 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 TBX15Q96SF7 602 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 ATP5SQ99766 215 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 GNG13Q9P2W3 67 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 CABIN1Q9Y6J0 2220 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 PI4KAP42356 2102 aa18.9■□□□□ 0.62
CLDND1-202ENST00000394180 A8MXE2 369 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 UCP1P25874 307 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 NKX2-1P43699 371 aaPredicted RBP18.89■□□□□ 0.61
CLDND1-202ENST00000394180 RAB7AP51149 207 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 OTPQ5XKR4 325 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 PRSS58Q8IYP2 241 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 OR1N1Q8NGS0 311 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 OR2AJ1Q8NGZ0 328 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 LMX1AQ8TE12 382 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 ELL3Q9HB65 397 aaPredicted RBP18.89■□□□□ 0.61
CLDND1-202ENST00000394180 FSCN3Q9NQT6 498 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 CACNA1EQ15878 2313 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 TRAV39A0A0B4J263 110 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 CLEC18AA5D8T8 446 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 PLPP3O14495 311 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 NPIPB7O75200 414 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 SELEP16581 610 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 SLC37A1P57057 533 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 TRA2AQ13595 282 aaKnown RBP eCLIP18.89■□□□□ 0.61
CLDND1-202ENST00000394180 BSXQ3C1V8 233 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 CLEC18CQ8NCF0 446 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 SLC24A4Q8NFF2 622 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 OR5C1Q8NGR4 320 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 ZPBPQ9BS86 351 aa18.89■□□□□ 0.61
CLDND1-202ENST00000394180 SYNGR4O95473 234 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 GABREP78334 506 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 ZP4Q12836 540 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 LPAL2Q16609 132 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 PRSS41Q7RTY9 318 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 OR2T10Q8NGZ9 312 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 C16orf52Q8NHV5 167 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 MOB3AQ96BX8 217 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 SLAMF6Q96DU3 332 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 REPIN1Q9BWE0 567 aaKnown RBP18.88■□□□□ 0.61
CLDND1-202ENST00000394180 TRBV11-1A0A0K0K1C0 115 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 B4DGG1 531 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 PROB1E7EW31 1015 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 MMP23AO75900 390 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 KBTBD11O94819 623 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 MPZL1O95297 269 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 GZMHP20718 246 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 ZNF787Q6DD87 383 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 P4HA3Q7Z4N8 544 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 C11orf42Q8N5U0 333 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 ADAMTS18Q8TE60 1221 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 SLC35E1Q96K37 410 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 CENPMQ9NSP4 180 aa18.88■□□□□ 0.61
CLDND1-202ENST00000394180 TMEM250H0YL14 139 aa18.87■□□□□ 0.61
CLDND1-202ENST00000394180 PIAS2O75928 621 aa18.87■□□□□ 0.61
CLDND1-202ENST00000394180 MDKP21741 143 aaPredicted RBP18.87■□□□□ 0.61
CLDND1-202ENST00000394180 SLC37A2Q8TED4 501 aa18.87■□□□□ 0.61
CLDND1-202ENST00000394180 GPER1Q99527 375 aa18.87■□□□□ 0.61
CLDND1-202ENST00000394180 PSMG3Q9BT73 122 aaPredicted RBP18.87■□□□□ 0.61
CLDND1-202ENST00000394180 OR10A5Q9H207 317 aa18.87■□□□□ 0.61
CLDND1-202ENST00000394180 ZNF701Q9NV72 531 aaPredicted RBP18.87■□□□□ 0.61
CLDND1-202ENST00000394180 PILRBQ9UKJ0 227 aa18.87■□□□□ 0.61
CLDND1-202ENST00000394180 FUT9Q9Y231 359 aa18.87■□□□□ 0.61
CLDND1-202ENST00000394180 ZNF705FA8MVS1 300 aaPredicted RBP18.86■□□□□ 0.61
CLDND1-202ENST00000394180 ZNF705DP0CH99 300 aaPredicted RBP18.86■□□□□ 0.61
CLDND1-202ENST00000394180 ZNF705BP0CI00 300 aaPredicted RBP18.86■□□□□ 0.61
CLDND1-202ENST00000394180 ESDP10768 282 aa18.86■□□□□ 0.61
CLDND1-202ENST00000394180 KCNIP4Q6PIL6 250 aa18.86■□□□□ 0.61
CLDND1-202ENST00000394180 ZNF248Q8NDW4 579 aa18.86■□□□□ 0.61
CLDND1-202ENST00000394180 CPEB3Q8NE35 698 aaKnown RBP18.86■□□□□ 0.61
CLDND1-202ENST00000394180 IFI44Q8TCB0 444 aa18.86■□□□□ 0.61
CLDND1-202ENST00000394180 TMEM37Q8WXS4 190 aa18.86■□□□□ 0.61
CLDND1-202ENST00000394180 SLC2A9Q9NRM0 540 aa18.86■□□□□ 0.61
CLDND1-202ENST00000394180 TMEM106BQ9NUM4 274 aa18.86■□□□□ 0.61
CLDND1-202ENST00000394180 CHTOPQ9Y3Y2 248 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms