RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 PAX6P26367 422 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 RUNX1Q01196 453 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 SELENOHQ8IZQ5 122 aaKnown RBP11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 SUMF2Q8NBJ7 301 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 OR5C1Q8NGR4 320 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 CCL28Q9NRJ3 127 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 ZNF391Q9UJN7 358 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 FAM186AA6NE01 2351 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 HLA-HP01893 362 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 TK1P04183 234 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 NQO2P16083 231 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 AGAP20933 346 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 FOXG1P55316 489 aaPredicted RBP11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 ARF1P84077 181 aaKnown RBP11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 PRDX4Q13162 271 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 HAGHQ16775 308 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 SOHLH1Q5JUK2 328 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 PPP1R32Q7Z5V6 425 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 GLRX2Q9NS18 164 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 TMEM252Q8N6L7 170 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 FAM86C1Q9NVL1 165 aa11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 NOSIPQ9Y314 301 aaKnown RBP11.98□□□□□ -0.49
GAPVD1-205ENST00000394084 C5orf49A4QMS7 147 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 PROB1E7EW31 1015 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 CDS2O95674 445 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 DYNLT3P51808 116 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 HERPUD1Q15011 391 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 RNF212Q495C1 297 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 OR1J1Q8NGS3 322 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 DOCK7Q96N67 2140 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 SLC22A20A6NK97 555 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 MRPL33O75394 65 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 TMEM50AO95807 157 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 S100A9P06702 114 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 FBP1P09467 338 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 EPHA1P21709 976 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 ZNF266Q14584 549 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 ACER2Q5QJU3 275 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 SPINK14Q6IE38 97 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 LILRB1Q8NHL6 650 aaPredicted RBP11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 HLA-CQ95604 372 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 ZNF488Q96MN9 340 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 C1QTNF5Q9BXJ0 243 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 C11orf1Q9H5F2 150 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 Q9N2K0 584 aa11.97□□□□□ -0.49
GAPVD1-205ENST00000394084 LMO1P25800 156 aa11.96□□□□□ -0.49
GAPVD1-205ENST00000394084 RIPPLY2Q5TAB7 128 aa11.96□□□□□ -0.49
GAPVD1-205ENST00000394084 PLEKHF2Q9H8W4 249 aa11.96□□□□□ -0.49
GAPVD1-205ENST00000394084 CALHM2Q9HA72 323 aa11.96□□□□□ -0.49
GAPVD1-205ENST00000394084 AHCTF1Q8WYP5 2266 aa11.96□□□□□ -0.49
GAPVD1-205ENST00000394084 URB1O60287 2271 aaKnown RBP11.96□□□□□ -0.49
GAPVD1-205ENST00000394084 ZNF732B4DXR9 585 aa11.96□□□□□ -0.5
GAPVD1-205ENST00000394084 H3BP45 60 aa11.96□□□□□ -0.5
GAPVD1-205ENST00000394084 NTN3O00634 580 aaPredicted RBP11.96□□□□□ -0.5
GAPVD1-205ENST00000394084 UBE2CO00762 179 aa11.96□□□□□ -0.5
GAPVD1-205ENST00000394084 SRPXP78539 464 aa11.96□□□□□ -0.5
GAPVD1-205ENST00000394084 ZFP36L1Q07352 338 aaKnown RBP11.96□□□□□ -0.5
GAPVD1-205ENST00000394084 ZNF154Q13106 437 aa11.96□□□□□ -0.5
GAPVD1-205ENST00000394084 OR51B6Q9H340 312 aa11.96□□□□□ -0.5
GAPVD1-205ENST00000394084 MTCH1Q9NZJ7 389 aa11.96□□□□□ -0.5
GAPVD1-205ENST00000394084 LIPGQ9Y5X9 500 aa11.96□□□□□ -0.5
GAPVD1-205ENST00000394084 RBFOX3A6NFN3 312 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 ZNF727A8MUV8 499 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 TXNL1O43396 289 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 CYTIPO60759 359 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 PITX3O75364 302 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 MRPL21Q7Z2W9 205 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 WDR5BQ86VZ2 330 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 TMEM56Q96MV1 263 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 TAAR9Q96RI9 348 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 SPIN2AQ99865 258 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 SPIN2BQ9BPZ2 258 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 PRRG4Q9BZD6 226 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 PLSCR2Q9NRY7 297 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 LYRM2Q9NU23 88 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 TMEM56-RWDD3S4R434 201 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 IGKV1-6A0A0C4DH72 117 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 WRBO00258 174 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 ATXN7O15265 892 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 SYNGR1O43759 233 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 OR2C1O95371 312 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 CELA3AP09093 270 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 RPS23P62266 143 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 RHEBQ15382 184 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 IGFBP7Q16270 282 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 IZUMO4Q1ZYL8 232 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 SPSB3Q6PJ21 355 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 P4HA3Q7Z4N8 544 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 ODF3L1Q8IXM7 274 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 FAM185AQ8N0U4 392 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 LFNGQ8NES3 379 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 CPNE4Q96A23 557 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 SPSB4Q96A44 273 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 TUBA4BQ9H853 241 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 ZNF503-AS2A6NEH8 195 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 HS3ST1O14792 307 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 CHST1O43916 411 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 NGFP01138 241 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 CYB561P49447 251 aa11.95□□□□□ -0.5
GAPVD1-205ENST00000394084 RND3P61587 244 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms