RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SMDT1Q9H4I9 107 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 ADAM20O43506 726 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 SSSCA1O60232 199 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 ARG1P05089 322 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 S100A8P05109 93 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 SCTP09683 121 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 NRN1LQ496H8 165 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 CXorf66Q5JRM2 361 aaPredicted RBP16.18■□□□□ 0.18
CBX1-202ENST00000393408 RBMS3Q6XE24 437 aaKnown RBP16.18■□□□□ 0.18
CBX1-202ENST00000393408 GAPTQ8N292 157 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 TMEM252Q8N6L7 170 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 ZNF565Q8N9K5 539 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 LILRB1Q8NHL6 650 aaPredicted RBP16.18■□□□□ 0.18
CBX1-202ENST00000393408 HS3ST6Q96QI5 342 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 ABHD14AQ9BUJ0 271 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 SLC25A31Q9H0C2 315 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 CRIM1Q9NZV1 1036 aa16.18■□□□□ 0.18
CBX1-202ENST00000393408 MRPS18CQ9Y3D5 142 aaKnown RBP16.18■□□□□ 0.18
CBX1-202ENST00000393408 CLEC18AA5D8T8 446 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 PROB1E7EW31 1015 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 GPR37O15354 613 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 SMIM6P0DI80 62 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 CBR1P16152 277 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 OMGP23515 440 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 OTX2P32243 289 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 GFRA1P56159 465 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 FGF12P61328 243 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 CCL20P78556 96 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 PRDX4Q13162 271 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 HERPUD1Q15011 391 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 SPSB3Q6PJ21 355 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 SAXO1Q8IYX7 474 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 FAM24BQ8N5W8 94 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 CLEC18CQ8NCF0 446 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 OR8G5Q8NG78 346 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 SNIP1Q8TAD8 396 aaKnown RBP16.17■□□□□ 0.18
CBX1-202ENST00000393408 REPIN1Q9BWE0 567 aaKnown RBP16.17■□□□□ 0.18
CBX1-202ENST00000393408 MAGT1Q9H0U3 335 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 GLRX2Q9NS18 164 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 RYDENQ9NUL5 291 aaKnown RBP16.17■□□□□ 0.18
CBX1-202ENST00000393408 IGKV1D-13A0A0B4J2D9 117 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 A0A1W2PPE2 198 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 PINLYPA6NC86 204 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 IGKV1-13P0DP09 117 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 ZNF14P17017 642 aaPredicted RBP16.17■□□□□ 0.18
CBX1-202ENST00000393408 GDF1P27539 372 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 RAB1AP62820 205 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 NMSQ5H8A3 153 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 ODF3L1Q8IXM7 274 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 HLA-CQ95604 372 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 MALSU1Q96EH3 234 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 GPHA2Q96T91 129 aa16.17■□□□□ 0.18
CBX1-202ENST00000393408 METTL1Q9UBP6 276 aaKnown RBP16.17■□□□□ 0.18
CBX1-202ENST00000393408 CCDC163A0A0D9SF12 145 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 DUXBA0A1W2PPF3 345 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 SLC22A20A6NK97 555 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 TUSC2O75896 110 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 FOXO1Q12778 655 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 SOHLH1Q5JUK2 328 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 ACER2Q5QJU3 275 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 ZFP62Q8NB50 900 aaPredicted RBP16.16■□□□□ 0.18
CBX1-202ENST00000393408 SUMF2Q8NBJ7 301 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 SIGLEC12Q96PQ1 595 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 UCP1P25874 307 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 HAAOP46952 286 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 DUSP3P51452 185 aaPredicted RBP16.16■□□□□ 0.18
CBX1-202ENST00000393408 GPM6AP51674 278 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 VAMP2P63027 116 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 PLPPR1Q8TBJ4 325 aa16.16■□□□□ 0.18
CBX1-202ENST00000393408 RBFOX3A6NFN3 312 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 CDRT15L2A8MXV6 281 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 TMEM50AO95807 157 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 IGHV2-5P01817 119 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 MAS1LP35410 378 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 ARF1P84077 181 aaKnown RBP16.15■□□□□ 0.18
CBX1-202ENST00000393408 ID3Q02535 119 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 OR5C1Q8NGR4 320 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 NANPQ8TBE9 248 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 SEBOXQ9HB31 216 aaPredicted RBP16.15■□□□□ 0.18
CBX1-202ENST00000393408 IL36RNQ9UBH0 155 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 NOSIPQ9Y314 301 aaKnown RBP16.15■□□□□ 0.18
CBX1-202ENST00000393408 PATE3B3GLJ2 98 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 VDAC1P21796 283 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 HOXA6P31267 233 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 DYNLT3P51808 116 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 FABP9Q0Z7S8 132 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 SP5Q6BEB4 398 aaPredicted RBP16.15■□□□□ 0.18
CBX1-202ENST00000393408 SLC16A13Q7RTY0 426 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 YPEL4Q96NS1 127 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 TCFL5Q9UL49 500 aa16.15■□□□□ 0.18
CBX1-202ENST00000393408 PUS1Q9Y606 427 aaKnown RBP eCLIP16.15■□□□□ 0.18
CBX1-202ENST00000393408 TNRC6AQ8NDV7 1962 aaKnown RBP16.15■□□□□ 0.18
CBX1-202ENST00000393408 PCSK5Q92824 1860 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 IGKV3D-15A0A087WSY6 115 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 IGKV1-6A0A0C4DH72 117 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 ZNF732B4DXR9 585 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 ZNHIT1O43257 154 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 HSPA12AO43301 675 aa16.14■□□□□ 0.17
CBX1-202ENST00000393408 MRPL33O75394 65 aaKnown RBP16.14■□□□□ 0.17
CBX1-202ENST00000393408 MMP9P14780 707 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms