RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 PRSS12P56730 875 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 SUPT4H1P63272 117 aaKnown RBP8.35□□□□□ -1.07
COL6A3-204ENST00000392003 EIF5AL1Q6IS14 154 aaKnown RBP8.35□□□□□ -1.07
COL6A3-204ENST00000392003 MCEMP1Q8IX19 187 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 SKA3Q8IX90 412 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 OR10D4PQ8NGN7 298 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 STOML3Q8TAV4 291 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 TOMM40LQ969M1 308 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 HDHD3Q9BSH5 251 aaPredicted RBP8.35□□□□□ -1.07
COL6A3-204ENST00000392003 ASF1BQ9NVP2 202 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 AK3Q9UIJ7 227 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 MYO7BQ6PIF6 2116 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 TRBV6-7A0A0A0MS04 114 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 CCNOP22674 350 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 NTF4P34130 210 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 PPIAP62937 165 aaKnown RBP8.35□□□□□ -1.07
COL6A3-204ENST00000392003 IAH1Q2TAA2 248 aaPredicted RBP8.35□□□□□ -1.07
COL6A3-204ENST00000392003 CRIP3Q6Q6R5 217 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 ZNF100Q8IYN0 542 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 SVBPQ8N300 66 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 NUDT10Q8NFP7 164 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 OR2M7Q8NG81 312 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 IP6K3Q96PC2 410 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 RNF126Q9BV68 326 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 TMEM231Q9H6L2 316 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 ZNF286AQ9HBT8 521 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 PARD6AQ9NPB6 346 aa8.35□□□□□ -1.07
COL6A3-204ENST00000392003 ZNF728P0DKX0 622 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 NAAAQ02083 359 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 ZNF92Q03936 586 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 HGFACQ04756 655 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 PEA15Q15121 130 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 TSPO2Q5TGU0 170 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 DTX1Q86Y01 620 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 FBXL14Q8N1E6 418 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 OR51F2Q8NH61 342 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 RNF141Q8WVD5 230 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 TMEM45BQ96B21 275 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 DIRC2Q96SL1 478 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 ZNF442Q9H7R0 627 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 OR2S2Q9NQN1 319 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 ST3GAL6Q9Y274 331 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 GVINP1Q7Z2Y8 2422 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 WDFY4Q6ZS81 3184 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 ZFHX2Q9C0A1 2572 aaPredicted RBP8.34□□□□□ -1.07
COL6A3-204ENST00000392003 PINLYPA6NC86 204 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 VSTM5A8MXK1 200 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 ZNF587BE7ETH6 402 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 ITGB1BP1O14713 200 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 LINC00614P0C842 121 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 ARG2P78540 354 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 ARF1P84077 181 aaKnown RBP8.34□□□□□ -1.07
COL6A3-204ENST00000392003 FAM3AP98173 230 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 RAB32Q13637 225 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 FAM185AQ8N0U4 392 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 CLCC1Q96S66 551 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 CALHM2Q9HA72 323 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 SEPSECSQ9HD40 501 aaKnown RBP8.34□□□□□ -1.07
COL6A3-204ENST00000392003 hCG_38984A0A1B0GV85 526 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 hCG_1809904A0A1W2PP81 198 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 A0A1W2PR64 198 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 A0A1W2PRV1 198 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 KCNAB3O43448 404 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 GFRA1P56159 465 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 HERV-K104P61576 105 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 C9orf135Q5VTT2 229 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 PSMF1Q92530 271 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 ARL11Q969Q4 196 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 CYYR1Q96J86 154 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 OR10C1Q96KK4 312 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 SYT3Q9BQG1 590 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 OTOGLQ3ZCN5 2332 aa8.34□□□□□ -1.07
COL6A3-204ENST00000392003 KIAA1549Q9HCM3 1950 aa8.34□□□□□ -1.08
COL6A3-204ENST00000392003 GEMIN2O14893 280 aaKnown RBP8.33□□□□□ -1.08
COL6A3-204ENST00000392003 CHATP28329 748 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 PTGER4P35408 488 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 RRADP55042 308 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 FXYD4P59646 89 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 CDCP2Q5VXM1 449 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 TMEM42Q69YG0 159 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 MRPL21Q7Z2W9 205 aaKnown RBP8.33□□□□□ -1.08
COL6A3-204ENST00000392003 POC1AQ8NBT0 407 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 ISOC2Q96AB3 205 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 PRRX2Q99811 253 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 FAM86C1Q9NVL1 165 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 OR5AC2Q9NZP5 309 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 IGKV1-27A0A075B6S5 117 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 IGKV1D-8A0A087WSZ0 117 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 A6NLC8 198 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 F8VVB4 439 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 F8VWA3 439 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 H0YIZ8 118 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 PDCD6O75340 191 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 OR7C1O76099 320 aaPredicted RBP8.33□□□□□ -1.08
COL6A3-204ENST00000392003 HEXAP06865 529 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 FCGR3AP08637 254 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 APLNRP35414 380 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 PLP2Q04941 152 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 PIGYQ3MUY2 71 aa8.33□□□□□ -1.08
COL6A3-204ENST00000392003 NRN1LQ496H8 165 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms