RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 ANKRD55Q3KP44 614 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 CDC20BQ86Y33 519 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 RPS4Y2Q8TD47 263 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 BTF3L4Q96K17 158 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 AMELYQ99218 206 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 OR51I2Q9H344 312 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 LIPT2A6NK58 231 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 PRSS12P56730 875 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 PAX5Q02548 391 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 EGR4Q05215 589 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 GJC3Q8NFK1 279 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 PIGCQ92535 297 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 SLC2A8Q9NY64 477 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 PAM16Q9Y3D7 125 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 ZNF320A2RRD8 509 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 DHHO43323 396 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 FREM3P0C091 2139 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 COX6A1P12074 109 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 FKBP2P26885 142 aaKnown RBP16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 EXTL1Q92935 676 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 RNF126Q9BV68 326 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 RYDENQ9NUL5 291 aaKnown RBP16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 FUT9Q9Y231 359 aa16.5■□□□□ 0.23
PPFIA1-202ENST00000389547 MSR1P21757 451 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 BATF2Q8N1L9 274 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 BHLHE23Q8NDY6 225 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 OR56B2PQ8NGI1 322 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 OR5C1Q8NGR4 320 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 OR10D3Q8NH80 312 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 OR2V1Q8NHB1 315 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 SPOCK3Q9BQ16 436 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 FAM173AQ9BQD7 235 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 TUBA4BQ9H853 241 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 NKX2-8O15522 239 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 SDSLQ96GA7 329 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 SEBOXQ9HB31 216 aaPredicted RBP16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 TRANK1O15050 2925 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 OPN1MWP04001 364 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 OPN1MW2P0DN77 364 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 OPN1MW3P0DN78 364 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 ACP1P24666 158 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 GGTLC2Q14390 218 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 LHX4Q969G2 390 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 NDUFAF3Q9BU61 184 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 SH3BGRL3Q9H299 93 aa16.49■□□□□ 0.23
PPFIA1-202ENST00000389547 HSPB2A8KAH6 182 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 C9JQL5 133 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HIST1H2BKO60814 126 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HIST1H2BJP06899 126 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 GUSBP08236 651 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 METTL15P1P0C7V9 234 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HIST1H2BOP23527 126 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HIST1H2BBP33778 126 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HIST1H2BDP58876 126 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 KRTDAPP60985 99 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HIST1H2BCP62807 126 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HSPB2Q16082 182 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HIST2H2BEQ16778 126 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 CEACAM16Q2WEN9 425 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 OR4C5Q8NGB2 326 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HIST1H2BHQ93079 126 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HIST1H2BNQ99877 126 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HIST1H2BMQ99879 126 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 ADAM19Q9H013 955 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 KCNS2Q9ULS6 477 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 DIDO1Q9BTC0 2240 aaKnown RBP16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 ASAH2BP0C7U1 165 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 SFTPCP11686 197 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 FGF8P55075 233 aaPredicted RBP16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 MTCP1P56278 107 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 MALLQ13021 153 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 MPV17LQ2QL34 196 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 PLPPR5Q32ZL2 321 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 MRPL21Q7Z2W9 205 aaKnown RBP16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 GCNT2Q8N0V5 402 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 APH1AQ96BI3 265 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 HES7Q9BYE0 225 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 MSL2Q9HCI7 577 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 TMED3Q9Y3Q3 217 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 RAC1P63000 192 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 ZNF468Q5VIY5 522 aaPredicted RBP16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 Q8WTZ3 238 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 BORCS8Q96FH0 119 aa16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 ZNF107Q9UII5 783 aaPredicted RBP16.48■□□□□ 0.23
PPFIA1-202ENST00000389547 M0QZK8 103 aa16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 GGCTO75223 188 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 MAGEA5P43359 124 aa16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 GALR1P47211 349 aa16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 OR3A1P47881 315 aa16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 ZNF92Q03936 586 aa16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 TNFRSF9Q07011 255 aa16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 ZADH2Q8N4Q0 377 aa16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 ZNF286AQ9HBT8 521 aa16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 F8VVB4 439 aa16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 F8VWA3 439 aa16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 HMGB3O15347 200 aaKnown RBP16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 MEOX1P50221 254 aa16.47■□□□□ 0.23
PPFIA1-202ENST00000389547 WDR25Q64LD2 544 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms