RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 HIST1H2BDP58876 126 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 HIST1H2BCP62807 126 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 HIST2H2BEQ16778 126 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 PNLIPRP3Q17RR3 467 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 C10orf128Q5T292 105 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 FAM89BQ8N5H3 189 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 HAS2Q92819 552 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 HIST1H2BHQ93079 126 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 WFIKKN1Q96NZ8 548 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 HIST1H2BNQ99877 126 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 HIST1H2BMQ99879 126 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 ZNF700Q9H0M5 742 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 WDR54Q9H977 334 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 ANAPC10Q9UM13 185 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 V9GYS6 101 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 IGLV3-1P01715 115 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 OR8U9P0C7N5 309 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 SELEP16581 610 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 ZNF32P17041 273 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 FXYD4P59646 89 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 IL11RAQ14626 422 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 PIGYQ3MUY2 71 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 TRIM61Q5EBN2 209 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 TSPO2Q5TGU0 170 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 C5orf24Q7Z6I8 188 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 LHFPL1Q86WI0 220 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 OR1L6Q8NGR2 347 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 OR2Y1Q8NGV0 311 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 OR8U1Q8NH10 309 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 REEP6Q96HR9 211 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 LIME1Q9H400 295 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 TUBA4BQ9H853 241 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 CYTL1Q9NRR1 136 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 FOXD3Q9UJU5 478 aaPredicted RBP10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 PADI1Q9ULC6 663 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 ZNF407Q9C0G0 2248 aa10.15□□□□□ -0.78
RAPGEF3-201ENST00000389212 LOC102725191A0A1B0GVB3 256 aa10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 FOXI3A8MTJ6 420 aaPredicted RBP10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 DFFBO76075 338 aa10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 PTBP3O95758 552 aaKnown RBP10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 SCGB1D2O95969 90 aa10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 FOLR3P41439 243 aa10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 VAMP2P63027 116 aa10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 Q0VFX4 171 aa10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 LEMD1Q68G75 181 aa10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 SLC23A3Q6PIS1 610 aa10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 HIST3H2BBQ8N257 126 aa10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 NUDT16L1Q9BRJ7 211 aaKnown RBP10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 NMES1Q9C002 83 aa10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 PRRC2CQ9Y520 2896 aaKnown RBP10.15□□□□□ -0.79
RAPGEF3-201ENST00000389212 TEX13DA0A0J9YY54 714 aaPredicted RBP10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 ZNF320A2RRD8 509 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 HSBP1L1C9JCN9 74 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 CD46P15529 392 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 LPAR6P43657 344 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 UCP3P55916 312 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 MLF1P58340 268 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 EIF5AP63241 154 aaKnown RBP10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 EXT1Q16394 746 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 SPTSSAQ969W0 71 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 CLUHP3Q96NS8 147 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 LPAR3Q9UBY5 353 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 NXT1Q9UKK6 140 aaKnown RBP10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 A0A0U1RQV5 110 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 CSTBP04080 98 aaKnown RBP10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 JMJD7P0C870 316 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 TRGC1P0CF51 173 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 CTSSP25774 331 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 SOHLH1Q5JUK2 328 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 PEG10Q86TG7 708 aaKnown RBP10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 ABHD3Q8WU67 409 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 EGLN1Q9GZT9 426 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 NCOR1P1Q9H4R4 102 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 AK3Q9UIJ7 227 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 HSF4Q9ULV5 492 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 DOCK10Q96BY6 2186 aa10.14□□□□□ -0.79
RAPGEF3-201ENST00000389212 PINLYPA6NC86 204 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 FIGNL2A6NMB9 653 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 J3QW42 95 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 SRYQ05066 204 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 CLEC12BQ2HXU8 276 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 CEACAM16Q2WEN9 425 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 PP6455Q8WZ26 134 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 C14orf166Q9Y224 244 aaKnown RBP10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 PPIAL4AQ9Y536 164 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 TGIF2-C20orf24A0A0A6YYL0 155 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 CBR3O75828 277 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 P04436 131 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 OTX1P32242 354 aaPredicted RBP10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 TNFSF10P50591 281 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 TAS2R46P59540 309 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 RBX1P62877 108 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 IAH1Q2TAA2 248 aaPredicted RBP10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 RPL7L1Q6DKI1 246 aaKnown RBP10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 AAED1Q7RTV5 226 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 C17orf78Q8N4C9 275 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 EMG1Q92979 244 aaKnown RBP10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 RAB18Q9NP72 206 aa10.13□□□□□ -0.79
RAPGEF3-201ENST00000389212 DEPPQ9NTK1 212 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms