RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 PIGTQ969N2 578 aa16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 PARD6GQ9BYG4 376 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 AURKAIP1Q9NWT8 199 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 TGFBR3LH3BV60 316 aa16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 GALR2O43603 387 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 CTGFP29279 349 aa16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 GPR3P46089 330 aa16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 GABREP78334 506 aa16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 RIPPLY2Q5TAB7 128 aa16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 CYP2G1PQ6ZSU1 146 aa16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 HOXB13Q92826 284 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 LIN37Q96GY3 246 aaPredicted RBP16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 GPHA2Q96T91 129 aa16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 ATP5SQ99766 215 aa16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 PLK3Q9H4B4 646 aa16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 ZNF581Q9P0T4 197 aa16.5■□□□□ 0.23
SMARCD1-201ENST00000381513 CHST1O43916 411 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 POU3F1Q03052 451 aaPredicted RBP16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 Q6ZWC4 215 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 BTF3L4Q96K17 158 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 LOC102724200A0A096LPH7 203 aaPredicted RBP16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 H0YIG0 161 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 M0QZ24 198 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 IL11P20809 199 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 CARD18P57730 90 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 TPPP2P59282 170 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 C9orf50Q5SZB4 431 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 Q6ZN92 141 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 OR8B12Q8NGG6 310 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 TNFRSF10CO14798 259 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 GNRHRP30968 328 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 ZNF121P58317 390 aaPredicted RBP16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 TMEM267Q0VDI3 215 aaPredicted RBP16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 MRGPRGQ86SM5 289 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 FAM89BQ8N5H3 189 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 LHX4Q969G2 390 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 SPIN2AQ99865 258 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 SPIN2BQ9BPZ2 258 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 RTN4RQ9BZR6 473 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 PRTFDC1Q9NRG1 225 aa16.49■□□□□ 0.23
SMARCD1-201ENST00000381513 EFEMP2O95967 443 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 CISD3P0C7P0 127 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 KRTDAPP60985 99 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 MCEMP1Q8IX19 187 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 CCDC71LQ8N9Z2 235 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 P2RX4Q99571 388 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 FAM103A1Q9BTL3 118 aaKnown RBP16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 ZNF319Q9P2F9 582 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 MYO7BQ6PIF6 2116 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 IGKV1-9A0A0C4DH69 117 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 A0A1W2PR80 420 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 SLC31A1O15431 190 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 NDUFB8O95169 186 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 CDS2O95674 445 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 TMEM50AO95807 157 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 HNRNPA3P51991 378 aaKnown RBP16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 MTCP1P56278 107 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 UNQ5815/PRO19632Q6UWF5 114 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 CCL4L1Q8NHW4 92 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 NUDT22Q9BRQ3 303 aa16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 RYDENQ9NUL5 291 aaKnown RBP16.48■□□□□ 0.23
SMARCD1-201ENST00000381513 PLPP3O14495 311 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 MT-ATP6P00846 226 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 CTSBP07858 339 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 TPTE2P1Q5T6R2 138 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 MOB3AQ96BX8 217 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 RASL10BQ96S79 203 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 TMED7-TICAM2A0A0A6YYA0 188 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 KBTBD11O94819 623 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 SLC6A8P48029 635 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 HINT1P49773 126 aaPredicted RBP16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 CLDN17P56750 224 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 UBE2V1Q13404 147 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 KIR2DS3Q14952 304 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 TEX43Q6ZNM6 134 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 LRTM2Q8N967 370 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 OR4F5Q8NH21 305 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 OR4F4Q96R69 305 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 NXF5Q9H1B4 397 aaKnown RBP16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 FGF22Q9HCT0 170 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 IL3RAP26951 378 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 PRTGQ2VWP7 1150 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 OR2V1Q8NHB1 315 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 APH1AQ96BI3 265 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 DEC1Q9P2X7 70 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 DOCK11Q5JSL3 2073 aa16.47■□□□□ 0.23
SMARCD1-201ENST00000381513 TRAV1-1A0A0B4J248 108 aa16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 C3orf85A0A1B0GTC6 90 aa16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 SP5Q6BEB4 398 aaPredicted RBP16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 SLC39A11Q8N1S5 342 aa16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 GABRG3Q99928 467 aa16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 PARLQ9H300 379 aa16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 ZNF160Q9HCG1 818 aa16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 SLC39A9Q9NUM3 307 aa16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 PHF3Q92576 2039 aaKnown RBP16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 A0A1W2PP55 124 aa16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 HCRTR1O43613 425 aa16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 OR1D4P47884 311 aa16.46■□□□□ 0.23
SMARCD1-201ENST00000381513 GPM6BQ13491 265 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms