RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 CLDN34H7C241 214 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 ZNF154Q13106 437 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 ZNF488Q96MN9 340 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 USB1Q9BQ65 265 aaKnown RBP15.01□□□□□ -0.01
SGCB-201ENST00000381431 TOLLIPQ9H0E2 274 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 OTOFQ9HC10 1997 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 EGR4Q05215 589 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 STUMQ69YW2 141 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 SKA3Q8IX90 412 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 FAM103A1Q9BTL3 118 aaKnown RBP15.01□□□□□ -0.01
SGCB-201ENST00000381431 COL6A6A6NMZ7 2263 aa15.01□□□□□ -0.01
SGCB-201ENST00000381431 C20orf202A1L168 122 aa15□□□□□ -0.01
SGCB-201ENST00000381431 SYNGR2O43760 224 aa15□□□□□ -0.01
SGCB-201ENST00000381431 HPP00738 406 aa15□□□□□ -0.01
SGCB-201ENST00000381431 BTNL3Q6UXE8 466 aa15□□□□□ -0.01
SGCB-201ENST00000381431 ETV3LQ6ZN32 361 aa15□□□□□ -0.01
SGCB-201ENST00000381431 HOGA1Q86XE5 327 aa15□□□□□ -0.01
SGCB-201ENST00000381431 ZNRF4Q8WWF5 429 aa15□□□□□ -0.01
SGCB-201ENST00000381431 KCNK17Q96T54 332 aa15□□□□□ -0.01
SGCB-201ENST00000381431 LRFN3Q9BTN0 628 aa15□□□□□ -0.01
SGCB-201ENST00000381431 PLXNA1Q9UIW2 1896 aa15□□□□□ -0.01
SGCB-201ENST00000381431 LCTP09848 1927 aa15□□□□□ -0.01
SGCB-201ENST00000381431 TTC28Q96AY4 2481 aa15□□□□□ -0.01
SGCB-201ENST00000381431 MS4A18H0YCH9 400 aa15□□□□□ -0.01
SGCB-201ENST00000381431 SPINK4O60575 86 aa15□□□□□ -0.01
SGCB-201ENST00000381431 RAB13P51153 203 aa15□□□□□ -0.01
SGCB-201ENST00000381431 COL19A1Q14993 1142 aa15□□□□□ -0.01
SGCB-201ENST00000381431 MS4A18Q3C1V0 323 aa15□□□□□ -0.01
SGCB-201ENST00000381431 KLF4O43474 513 aa15□□□□□ -0.01
SGCB-201ENST00000381431 H2BFSP57053 126 aa15□□□□□ -0.01
SGCB-201ENST00000381431 TMEM255AQ5JRV8 349 aa15□□□□□ -0.01
SGCB-201ENST00000381431 RGP1Q92546 391 aaPredicted RBP15□□□□□ -0.01
SGCB-201ENST00000381431 CDX2Q99626 313 aaPredicted RBP15□□□□□ -0.01
SGCB-201ENST00000381431 FABP4P15090 132 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 CD200P41217 278 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 CEBPEQ15744 281 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 ZNF260Q3ZCT1 412 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 C9orf152Q5JTZ5 239 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 APOBEC4Q8WW27 367 aaKnown RBP14.99□□□□□ -0.01
SGCB-201ENST00000381431 A0A1W2PPH5 198 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 TRDCB7Z8K6 153 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 CHRNA7P36544 502 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 ZP4Q12836 540 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 UNQ9370/PRO34162Q6UXP9 181 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 MRGPRFQ96AM1 343 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 ZNF660Q6AZW8 331 aaPredicted RBP14.99□□□□□ -0.01
SGCB-201ENST00000381431 RGPD4Q7Z3J3 1758 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 C7orf77A4D0Y5 90 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 RBFOX3A6NFN3 312 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 MPV17LQ2QL34 196 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 FAM209AQ5JX71 171 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 FAM27BQ5VT28 67 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 CPEB3Q8NE35 698 aaKnown RBP14.99□□□□□ -0.01
SGCB-201ENST00000381431 PTX4Q96A99 478 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 TMEM18Q96B42 140 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 ZNF835Q9Y2P0 537 aa14.99□□□□□ -0.01
SGCB-201ENST00000381431 FSTP19883 344 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 C19orf57Q0VDD7 668 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 SCARF2Q96GP6 870 aaPredicted RBP14.98□□□□□ -0.01
SGCB-201ENST00000381431 OR5AC2Q9NZP5 309 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 C10orf35Q96D05 121 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 VWCEQ96DN2 955 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 TREM2Q9NZC2 230 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 TRBV5-7A0A0A0MS05 114 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 TOX4O94842 621 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 ERVFC1-1P60608 527 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 ACSM6Q6P461 480 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 SLC16A13Q7RTY0 426 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 TIMD4Q96H15 378 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 POM121L2Q96KW2 1035 aa14.98□□□□□ -0.01
SGCB-201ENST00000381431 ZNF737O75373 536 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 C1QL1O75973 258 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 RPL11P62913 178 aaKnown RBP14.97□□□□□ -0.01
SGCB-201ENST00000381431 PSG4Q00888 419 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 NHLH2Q02577 135 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 TMEM241Q24JQ0 296 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 C19orf48Q6RUI8 117 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 CCL17Q92583 94 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 LHFPL6Q9Y693 200 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 ADAM11O75078 769 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 FREM3P0C091 2139 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 TRIP6Q15654 476 aaKnown RBP14.97□□□□□ -0.01
SGCB-201ENST00000381431 MSL2Q9HCI7 577 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 CADP27708 2225 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 PCNX1Q96RV3 2341 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 ADRA2AP08913 450 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 IL24Q13007 206 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 GFRALQ6UXV0 394 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 KDF1Q8NAX2 398 aaPredicted RBP14.97□□□□□ -0.01
SGCB-201ENST00000381431 HEATR5BQ9P2D3 2071 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 DOCK8Q8NF50 2099 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 P2RY1P47900 373 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 EWSR1Q01844 656 aaKnown RBP eCLIP14.97□□□□□ -0.01
SGCB-201ENST00000381431 CRIPAKQ8N1N5 446 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 OR10G4Q8NGN3 311 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 OR10G9Q8NGN4 311 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 OR10G7Q8NGN6 311 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 FAM210BQ96KR6 192 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 GPHA2Q96T91 129 aa14.97□□□□□ -0.01
SGCB-201ENST00000381431 CLCF1Q9UBD9 225 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms