RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 KIAA0141Q14154 515 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-201ENST00000380829 SURF2Q15527 256 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-201ENST00000380829 PNLIPRP3Q17RR3 467 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 NSUN5P2Q63ZY6 315 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 P4HA3Q7Z4N8 544 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 GCNT2Q8N0V5 402 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 METTL9Q9H1A3 318 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 ZNF816-ZNF321PA0A0X1KG74 233 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 ZNF850A8MQ14 1090 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 H7C1Q1 480 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 NGFP01138 241 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 CSTBP04080 98 aaKnown RBP12.28□□□□□ -0.44
CLCN4-201ENST00000380829 CEACAM1P13688 526 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 S100A2P29034 98 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 SULT1A1P50225 295 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 NDUFA6P56556 154 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 ANKRD39Q53RE8 183 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 IGF2-ASQ6U949 168 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 CLEC9AQ6UXN8 241 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 LHFPL2Q6ZUX7 228 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 SLC25A42Q86VD7 318 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 OR56B2PQ8NGI1 322 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 OR10D4PQ8NGN7 298 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 OR51F2Q8NH61 342 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 MISP3Q96FF7 219 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 Q96M66 194 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 MYOZ1Q9NP98 299 aaPredicted RBP12.28□□□□□ -0.44
CLCN4-201ENST00000380829 DLL3Q9NYJ7 618 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 CRIM1Q9NZV1 1036 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 KPTNQ9Y664 436 aa12.28□□□□□ -0.44
CLCN4-201ENST00000380829 IGKV1-12A0A0C4DH73 117 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 BTBD17A6NE02 478 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 IGKV1D-12P01611 117 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 PMELP40967 661 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 TAF9Q16594 264 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 FBXW9Q5XUX1 488 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 RPL7L1Q6DKI1 246 aaKnown RBP12.27□□□□□ -0.44
CLCN4-201ENST00000380829 ALKBH2Q6NS38 261 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 IGFL2Q6UWQ7 119 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 Q6ZRG5 221 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 REC114Q7Z4M0 266 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 BATF2Q8N1L9 274 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 SPACA1Q9HBV2 294 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 ANAPC10Q9UM13 185 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 SLC7A11Q9UPY5 501 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 AMDHD2Q9Y303 409 aa12.27□□□□□ -0.44
CLCN4-201ENST00000380829 TNRC6AQ8NDV7 1962 aaKnown RBP12.27□□□□□ -0.45
CLCN4-201ENST00000380829 HOXB5P09067 269 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 AMY2BP19961 511 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 TBPP20226 339 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 HOXA5P20719 270 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 DDTP30046 118 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 ARR3P36575 388 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 NBL1P41271 181 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 DVL1P1P54792 670 aaPredicted RBP12.27□□□□□ -0.45
CLCN4-201ENST00000380829 BTNL8Q6UX41 500 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 OR1K1Q8NGR3 316 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 TMEM68Q96MH6 324 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 OR51B6Q9H340 312 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 PLEKHJ1Q9NW61 149 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 MED12LQ86YW9 2145 aa12.27□□□□□ -0.45
CLCN4-201ENST00000380829 AKAP13Q12802 2813 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 A0A087X0M5 115 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 TRAV17A0A0B4J275 112 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 A0A1B0GX30 115 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 HLA-GP17693 338 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 MPZP25189 248 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 FUT6P51993 359 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 SNU13P55769 128 aaKnown RBP12.26□□□□□ -0.45
CLCN4-201ENST00000380829 SPCS3P61009 180 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 SAT2Q96F10 170 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-201ENST00000380829 POM121L2Q96KW2 1035 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 TRIB1Q96RU8 372 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 HDHD3Q9BSH5 251 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-201ENST00000380829 REPIN1Q9BWE0 567 aaKnown RBP12.26□□□□□ -0.45
CLCN4-201ENST00000380829 ZNF701Q9NV72 531 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-201ENST00000380829 PPP1R14DQ9NXH3 145 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 GAR1Q9NY12 217 aaKnown RBP12.26□□□□□ -0.45
CLCN4-201ENST00000380829 ZDHHC8Q9ULC8 765 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 STARD10Q9Y365 291 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 TM4SF5O14894 197 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 ADAP1O75689 374 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 IL2RAP01589 272 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 IGHG3P01860 377 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 SFTPBP07988 381 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 COX5BP10606 129 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 RPS10P46783 165 aaKnown RBP12.26□□□□□ -0.45
CLCN4-201ENST00000380829 CDX1P47902 265 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-201ENST00000380829 PLP2Q04941 152 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 PIGYQ3MUY2 71 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 GFI1BQ5VTD9 330 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 MRPL21Q7Z2W9 205 aaKnown RBP12.26□□□□□ -0.45
CLCN4-201ENST00000380829 CALHM1Q8IU99 346 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 TGIF2LXQ8IUE1 241 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 MARCH1Q8TCQ1 289 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 APOBEC3DQ96AK3 386 aaPredicted RBP12.26□□□□□ -0.45
CLCN4-201ENST00000380829 LURAP1Q96LR2 239 aa12.26□□□□□ -0.45
CLCN4-201ENST00000380829 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.26□□□□□ -0.45
CLCN4-201ENST00000380829 ZNF891A8MT65 544 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms