RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 SMPD2O60906 423 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 CD226Q15762 336 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 COL13A1Q5TAT6 717 aaPredicted RBP10.98□□□□□ -0.65
CHD3-203ENST00000380358 GBGT1Q8N5D6 347 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 SERGEFQ9UGK8 458 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 SRSF10O75494 262 aaKnown RBP10.98□□□□□ -0.65
CHD3-203ENST00000380358 FPR2P25090 351 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 PTBP1P26599 531 aaKnown RBP eCLIP10.98□□□□□ -0.654e-13■■■■□ 25.1
CHD3-203ENST00000380358 AFMIDQ63HM1 303 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 TCTEX1D1Q8N7M0 179 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 SPNS1Q9H2V7 528 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 C9JCJ5 164 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 RIGQ13278 110 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 CDK5R1Q15078 307 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 GLDNQ6ZMI3 551 aaPredicted RBP10.98□□□□□ -0.65
CHD3-203ENST00000380358 OR10AC1Q8NH08 325 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 SLC25A10Q9UBX3 287 aaPredicted RBP10.98□□□□□ -0.65
CHD3-203ENST00000380358 ANXA10Q9UJ72 324 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 EPPINO95925 133 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 IGHV3-48P01763 117 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 NAT2P11245 290 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 NCMAPQ5T1S8 102 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 DPPA3Q6W0C5 159 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 CCL19Q99731 98 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 SEC11CQ9BY50 192 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 POMT2Q9UKY4 750 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 DAOP14920 347 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 HMGA1P17096 107 aaKnown RBP10.98□□□□□ -0.65
CHD3-203ENST00000380358 KIR2DS2P43631 304 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 HLA-DRB5Q30154 266 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 TOMM7Q9P0U1 55 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 ZIC3O60481 467 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 RAF1P04049 648 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 RAB32Q13637 225 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 LRP10Q7Z4F1 713 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 Q8IYB0 196 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 OR4S2Q8NH73 311 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
CHD3-203ENST00000380358 ZBTB42B2RXF5 422 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 MDKP21741 143 aaPredicted RBP10.97□□□□□ -0.65
CHD3-203ENST00000380358 ZNF56Q15929 161 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 WDR38Q5JTN6 314 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 ALKAL1Q6UXT8 129 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 OPN3Q9H1Y3 402 aaPredicted RBP10.97□□□□□ -0.65
CHD3-203ENST00000380358 HEXA-AS1Q9H8Q6 139 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 MUC20Q8N307 709 aaPredicted RBP10.97□□□□□ -0.65
CHD3-203ENST00000380358 VN1R17PQ8TDU5 208 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 FAM216AQ8WUB2 273 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 SFRP2Q96HF1 295 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 VSTM2LQ96N03 204 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 C11orf68Q9H3H3 251 aaKnown RBP10.97□□□□□ -0.65
CHD3-203ENST00000380358 SOX21Q9Y651 276 aaPredicted RBP10.97□□□□□ -0.65
CHD3-203ENST00000380358 WSB1Q9Y6I7 421 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 S4R3C0 116 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 TSPAN13O95857 204 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 ATP5J2P56134 94 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 SKP2Q13309 424 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 LIAT1Q6ZQX7 453 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 ITLN2Q8WWU7 325 aaPredicted RBP10.97□□□□□ -0.65
CHD3-203ENST00000380358 GATA6Q92908 595 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 OOEPA6NGQ2 149 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 PAGE4O60829 102 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 THY1P04216 161 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 ISOC2Q96AB3 205 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 ZNF488Q96MN9 340 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 GPR35Q9HC97 309 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 SPNP16150 400 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 MAS1LP35410 378 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 SNRPEP62304 92 aaKnown RBP10.97□□□□□ -0.65
CHD3-203ENST00000380358 YBX1P67809 324 aaKnown RBP10.97□□□□□ -0.65
CHD3-203ENST00000380358 DHRS4L2Q6PKH6 230 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 OR4D9Q8NGE8 314 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 NRTNQ99748 197 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 MRPL58Q14197 206 aaKnown RBP10.97□□□□□ -0.65
CHD3-203ENST00000380358 LSMEM1Q8N8F7 131 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 RGP1Q92546 391 aaPredicted RBP10.97□□□□□ -0.65
CHD3-203ENST00000380358 OR2A5Q96R48 311 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 CCL13Q99616 98 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 SPATA31D1Q6ZQQ2 1576 aa10.97□□□□□ -0.65
CHD3-203ENST00000380358 C3P01024 1663 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 SNRPGP15A8MWD9 76 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 DEDDO75618 318 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 WDR25Q64LD2 544 aaPredicted RBP10.96□□□□□ -0.65
CHD3-203ENST00000380358 SLC25A40Q8TBP6 338 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 ZFP64Q9NPA5 681 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 LHX9Q9NQ69 397 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 FBXL17Q9UF56 701 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 ARHGEF17Q96PE2 2063 aaPredicted RBP10.96□□□□□ -0.65
CHD3-203ENST00000380358 C11orf94C9JXX5 98 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 MBTPS2O43462 519 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 TFAP2AP05549 437 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 CLDN10P78369 228 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 TMEM128Q5BJH2 165 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 SIRT7Q9NRC8 400 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 CDK5RAP2Q96SN8 1893 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 KCNJ3P48549 501 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 SELENOPP49908 381 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.65
CHD3-203ENST00000380358 TCEAL1Q15170 157 aa10.96□□□□□ -0.65
CHD3-203ENST00000380358 PMS2CLQ68D20 193 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms