RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ZNF880Q6PDB4 577 aa10.82□□□□□ -0.68
PRPF40B-202ENST00000380281 FBXL14Q8N1E6 418 aa10.82□□□□□ -0.68
PRPF40B-202ENST00000380281 COMMD1Q8N668 190 aa10.82□□□□□ -0.68
PRPF40B-202ENST00000380281 SLC35G3Q8N808 338 aa10.82□□□□□ -0.68
PRPF40B-202ENST00000380281 PLPP5Q8NEB5 264 aa10.82□□□□□ -0.68
PRPF40B-202ENST00000380281 OR52M1Q8NGK5 317 aa10.82□□□□□ -0.68
PRPF40B-202ENST00000380281 ZNF700Q9H0M5 742 aa10.82□□□□□ -0.68
PRPF40B-202ENST00000380281 ZNF442Q9H7R0 627 aa10.82□□□□□ -0.68
PRPF40B-202ENST00000380281 GPR27Q9NS67 375 aa10.82□□□□□ -0.68
PRPF40B-202ENST00000380281 PHF1O43189 567 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 MRPS11P82912 194 aaKnown RBP10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 SRYQ05066 204 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 RAB30Q15771 203 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 NFAM1Q8NET5 270 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 RTN4IP1Q8WWV3 396 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 PTX4Q96A99 478 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 AK3Q9UIJ7 227 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 PTRH2Q9Y3E5 179 aaKnown RBP10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 A0A1W2PQM1 296 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 H3BP45 60 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 DVL1O14640 695 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 CA11O75493 328 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 TSPAN7P41732 249 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 UCP2P55851 309 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 RND3P61587 244 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 IL15RAQ13261 267 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 ARSJQ5FYB0 599 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 ZNF468Q5VIY5 522 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 MRGPRX4Q96LA9 322 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 OXGR1Q96P68 337 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 PNRC2Q9NPJ4 139 aaKnown RBP10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 SEMA5BQ9P283 1151 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 ZNF107Q9UII5 783 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 MEMO1Q9Y316 297 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 RBFOX3A6NFN3 312 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 GAPDHP04406 335 aaKnown RBP10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 CFIP05156 583 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 MSR1P21757 451 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 PAX5Q02548 391 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 ZP4Q12836 540 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 ETFRF1Q6IPR1 90 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 RHBDD2Q6NTF9 364 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 SLC25A47Q6Q0C1 308 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 ZFP62Q8NB50 900 aaPredicted RBP10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 OR2M3Q8NG83 312 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 OR5L2Q8NGL0 311 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 DIRC2Q96SL1 478 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 C1orf123Q9NWV4 160 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 DKKL1Q9UK85 242 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 OSGIN2Q9Y236 505 aa10.81□□□□□ -0.68
PRPF40B-202ENST00000380281 CST7O76096 145 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 TAS2R46P59540 309 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 RPS18P62269 152 aaKnown RBP10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 HIKESHIQ53FT3 197 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 FBXW12Q6X9E4 464 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 ZNF705AQ6ZN79 300 aaPredicted RBP10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 SPACA9Q96E40 222 aaPredicted RBP10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 TCF21O43680 179 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 ZNF728P0DKX0 622 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 HERPUD1Q15011 391 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 LPAL2Q16609 132 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 CLEC12BQ2HXU8 276 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 EMG1Q92979 244 aaKnown RBP10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 BORCS8Q96FH0 119 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 SHDQ96IW2 340 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 SCGB3A2Q96PL1 93 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 PITPNC1Q9UKF7 332 aa10.8□□□□□ -0.68
PRPF40B-202ENST00000380281 FAM24AA6NFZ4 105 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 DEDDO75618 318 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 EPHA1P21709 976 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 CFPP27918 469 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 PTGDSP41222 190 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 GLIPR1P48060 266 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 IZUMO4Q1ZYL8 232 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 VAX1Q5SQQ9 334 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 TMEM183AQ8IXX5 376 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 GJC3Q8NFK1 279 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 NIPSNAP3BQ9BS92 247 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 ASCL3Q9NQ33 180 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 MRPS18CQ9Y3D5 142 aaKnown RBP10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 A0A096LPE4 126 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 TRAV39A0A0B4J263 110 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 A0A1W2PPZ6 126 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 DHHO43323 396 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 TGOLN2O43493 480 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 DFFBO76075 338 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 CCL4P13236 92 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 MMP9P14780 707 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 RPS2P15880 293 aaKnown RBP10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 RSPO1Q2MKA7 263 aaPredicted RBP10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 TIPARPQ7Z3E1 657 aaKnown RBP10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 C1orf87Q8N0U7 546 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 ACTR3CQ9C0K3 210 aaPredicted RBP10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 ADAMTS9Q9P2N4 1935 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 DHRS3O75911 302 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 SEC11BP0C7V7 166 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 OR3A1P47881 315 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 SLC23A3Q6PIS1 610 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 TVP23CQ96ET8 276 aa10.79□□□□□ -0.68
PRPF40B-202ENST00000380281 ADGRG7Q96K78 797 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms