RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TRIB1Q96RU8 372 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 CHST5Q9GZS9 411 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 MS4A7Q9GZW8 240 aaPredicted RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 NPDC1Q9NQX5 325 aaPredicted RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 VAX2Q9UIW0 290 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 CUL9Q8IWT3 2517 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 GVINP1Q7Z2Y8 2422 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 IGKV1-8A0A0C4DH67 115 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 HRKO00198 91 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 DVL1O14640 695 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 COX7A2P2O60397 106 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 EML2O95834 649 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 CCKARP32238 428 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 RHOBP62745 196 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 HLA-BQ31612 363 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 RGS7BPQ6MZT1 257 aaPredicted RBP7.38□□□□□ -1.23
VPS36-201ENST00000378060 SLC16A13Q7RTY0 426 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 OR10G4Q8NGN3 311 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 OR10G9Q8NGN4 311 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 OR10G7Q8NGN6 311 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 OR13G1Q8NGZ3 307 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 SLC25A38Q96DW6 304 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 RASL10BQ96S79 203 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 NRIP2Q9BQI9 281 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 RAB33BQ9H082 229 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 LHX9Q9NQ69 397 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 GPR27Q9NS67 375 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 VSIG4Q9Y279 399 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 LIPGQ9Y5X9 500 aa7.38□□□□□ -1.23
VPS36-201ENST00000378060 TRGV5A0A0B4J1U4 118 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 CDRT15L2A8MXV6 281 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 FOXS1O43638 330 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 SULT1A2P50226 295 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 SMUG1Q53HV7 270 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 ETV3LQ6ZN32 361 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 C16orf47Q6ZP98 133 aaPredicted RBP7.37□□□□□ -1.23
VPS36-201ENST00000378060 TBC1D26Q86UD7 250 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 TMEM52Q8NDY8 209 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 ANAPC16Q96DE5 110 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 FAM103A1Q9BTL3 118 aaKnown RBP7.37□□□□□ -1.23
VPS36-201ENST00000378060 P4HTMQ9NXG6 502 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 AMDHD2Q9Y303 409 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 ASXL3Q9C0F0 2248 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 PRRG2O14669 202 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 CHST1O43916 411 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 CELA2BP08218 269 aaPredicted RBP7.37□□□□□ -1.23
VPS36-201ENST00000378060 HNF1AP20823 631 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 RAB7AP51149 207 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 DYNLT3P51808 116 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 ARL16Q0P5N6 197 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 WDR74Q6RFH5 385 aaPredicted RBP7.37□□□□□ -1.23
VPS36-201ENST00000378060 TOMM20LQ6UXN7 152 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 C19orf35Q6ZS72 473 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 MRGPRGQ86SM5 289 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 M1APQ8TC57 530 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 ADAT3Q96EY9 351 aaPredicted RBP7.37□□□□□ -1.23
VPS36-201ENST00000378060 TMEM56Q96MV1 263 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 TRBV5-7A0A0A0MS05 114 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 FAM74A7A6NL05 159 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 J3QR89 54 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 OR2A4O95047 310 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 TTRP02766 147 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 HES1Q14469 280 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 KHDC3LQ587J8 217 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 DCAF12L2Q5VW00 463 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 WDR73Q6P4I2 378 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 GUSBP11Q6P575 273 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 ADAD2Q8NCV1 583 aaKnown RBP7.37□□□□□ -1.23
VPS36-201ENST00000378060 OR10A7Q8NGE5 316 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 KISS1RQ969F8 398 aaPredicted RBP7.37□□□□□ -1.23
VPS36-201ENST00000378060 ISOC2Q96AB3 205 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 TIMD4Q96H15 378 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 OR2A7Q96R45 310 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 NDFIP1Q9BT67 221 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 PARD6AQ9NPB6 346 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 ZNF355PQ9NSJ1 428 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 CLCF1Q9UBD9 225 aa7.37□□□□□ -1.23
VPS36-201ENST00000378060 MRPS18BQ9Y676 258 aaKnown RBP7.37□□□□□ -1.23
VPS36-201ENST00000378060 H0Y8G0 127 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 CA6P23280 308 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 KIR2DS2P43631 304 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 EWSR1Q01844 656 aaKnown RBP eCLIP7.36□□□□□ -1.23
VPS36-201ENST00000378060 EIF3IQ13347 325 aaKnown RBP7.36□□□□□ -1.23
VPS36-201ENST00000378060 VAMP3Q15836 100 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 SPATA46Q5T0L3 261 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 TCTEX1D1Q8N7M0 179 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 SDHCQ99643 169 aaPredicted RBP7.36□□□□□ -1.23
VPS36-201ENST00000378060 KIAA1456Q9P272 454 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 PRSS50Q9UI38 385 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 TECTAO75443 2155 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 A0A1B0GU03 582 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 MFSD2BA6NFX1 497 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 ISG15P05161 165 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 FGF2P09038 288 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 OR1C1Q15619 314 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 TMEM183BQ1AE95 376 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 ZXDCQ2QGD7 858 aaPredicted RBP7.36□□□□□ -1.23
VPS36-201ENST00000378060 DPPA3Q6W0C5 159 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 GINS3Q9BRX5 216 aa7.36□□□□□ -1.23
VPS36-201ENST00000378060 FKBP11Q9NYL4 201 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms