RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 FAM25EA8MYX2 175 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 ATXN7O15265 892 aaPredicted RBP10.94□□□□□ -0.66
TRIM40-206ENST00000376724 TSC22D2O75157 780 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 NAPSAO96009 420 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 SCTP09683 121 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 ZNF250P15622 560 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 NFYAP23511 347 aaPredicted RBP10.94□□□□□ -0.66
TRIM40-206ENST00000376724 LY6DQ14210 128 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 RBM39Q14498 530 aaKnown RBP10.94□□□□□ -0.66
TRIM40-206ENST00000376724 PAN3Q58A45 887 aaKnown RBP10.94□□□□□ -0.66
TRIM40-206ENST00000376724 ZNF660Q6AZW8 331 aaPredicted RBP10.94□□□□□ -0.66
TRIM40-206ENST00000376724 DHRS11Q6UWP2 260 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 WDR82Q6UXN9 313 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 C20orf204Q6ZNR8 217 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 OR5T2Q8NGG2 359 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 MITD1Q8WV92 249 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 TMEM171Q8WVE6 324 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 DMRTA2Q96SC8 542 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 OPN4Q9UHM6 478 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 CADP27708 2225 aa10.94□□□□□ -0.66
TRIM40-206ENST00000376724 PLSCR5A0PG75 271 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 SH2D1BO14796 132 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 SPRY3O43610 288 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 IGHV3-13P01766 116 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 ATF4P18848 351 aaPredicted RBP10.93□□□□□ -0.66
TRIM40-206ENST00000376724 GLP1RP43220 463 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 SEC61A1P61619 476 aaKnown RBP10.93□□□□□ -0.66
TRIM40-206ENST00000376724 LY6G6FQ5SQ64 297 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 TMEM108Q6UXF1 575 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 CLEC18BQ6UXF7 455 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.93□□□□□ -0.66
TRIM40-206ENST00000376724 POC1AQ8NBT0 407 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 PDCD10Q9BUL8 212 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 C1orf123Q9NWV4 160 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 PCNX1Q96RV3 2341 aa10.93□□□□□ -0.66
TRIM40-206ENST00000376724 SLC33A1O00400 549 aaPredicted RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 ABCD4O14678 606 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 DUS4LO95620 317 aaKnown RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 SUPT4H1P63272 117 aaKnown RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 SNTB1Q13884 538 aaKnown RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 ATXN7L3Q14CW9 347 aaPredicted RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 SURF2Q15527 256 aaPredicted RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 FIP1L1Q6UN15 594 aaKnown RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 OR8H1Q8NGG4 311 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 MRPL30Q8TCC3 161 aaKnown RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 ELMOD3Q96FG2 381 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 SEC22AQ96IW7 307 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 MRPL37Q9BZE1 423 aaKnown RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 CLEC4MQ9H2X3 399 aaPredicted RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 TAAR3PQ9P1P4 343 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 CHD8Q9HCK8 2581 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 TRAV39A0A0B4J263 110 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 SFT2D2O95562 160 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 HAND1O96004 215 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 TFF1P04155 84 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 THBDP07204 575 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 ZNF728P0DKX0 622 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 PPP3CBP16298 524 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 RCC1P18754 421 aaPredicted RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 SSTR2P30874 369 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 ECI1P42126 302 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 RPS23P62266 143 aaKnown RBP10.92□□□□□ -0.66
TRIM40-206ENST00000376724 DHODHQ02127 395 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 ZNF146Q15072 292 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 TMEM65Q6PI78 240 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 GALNT11Q8NCW6 608 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 OR5M8Q8NGP6 311 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 FXYD6Q9H0Q3 95 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 TLNRD1Q9H1K6 362 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 IFT22Q9H7X7 185 aa10.92□□□□□ -0.66
TRIM40-206ENST00000376724 C13orf42A0A1B0GVH6 325 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 DPRXA6NFQ7 191 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 TRDCB7Z8K6 153 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 I3L521 148 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 CCL21O00585 134 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 AADACP22760 399 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 PTAFRP25105 342 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 CA7P43166 264 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 SELENOVP59797 346 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 BSPH1Q075Z2 132 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 MZT1Q08AG7 82 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 LGALSLQ3ZCW2 172 aaPredicted RBP10.91□□□□□ -0.66
TRIM40-206ENST00000376724 SPRNQ5BIV9 151 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 SPIN3Q5JUX0 258 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 ACP7Q6ZNF0 438 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 BOLLQ8N9W6 283 aaKnown RBP10.91□□□□□ -0.66
TRIM40-206ENST00000376724 ST6GALNAC3Q8NDV1 305 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 PLPPR1Q8TBJ4 325 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 LRRC29Q8WV35 223 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 WFIKKN1Q96NZ8 548 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 OR2V2Q96R30 315 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 USB1Q9BQ65 265 aaKnown RBP10.91□□□□□ -0.66
TRIM40-206ENST00000376724 RIMS4Q9H426 269 aaPredicted RBP10.91□□□□□ -0.66
TRIM40-206ENST00000376724 HES4Q9HCC6 221 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 ATP23Q9Y6H3 246 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 TEX13DA0A0J9YY54 714 aaPredicted RBP10.91□□□□□ -0.66
TRIM40-206ENST00000376724 KIR2DS1A0A191URI9 304 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 GLAP06280 429 aa10.91□□□□□ -0.66
TRIM40-206ENST00000376724 CTSDP07339 412 aaPredicted RBP10.91□□□□□ -0.66
TRIM40-206ENST00000376724 ACAA1P09110 424 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms