RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 C14orf166Q9Y224 244 aaKnown RBP8.19□□□□□ -1.1
TRIM39-202ENST00000376659 SHANK1Q9Y566 2161 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 TRAV24A0A0B4J272 114 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 PITX3O75364 302 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 WISP2O76076 250 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 NGFP01138 241 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 PET100P0DJ07 73 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF14P17017 642 aaPredicted RBP8.19□□□□□ -1.1
TRIM39-202ENST00000376659 S100PP25815 95 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 RFC3P40938 356 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 NPBWR1P48145 328 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 PDCD1Q15116 288 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 OR1C1Q15619 314 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF818PQ6ZRF7 136 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 DMRTC2Q8IXT2 367 aaPredicted RBP8.19□□□□□ -1.1
TRIM39-202ENST00000376659 SLC35G3Q8N808 338 aa8.19□□□□□ -1.1
TRIM39-202ENST00000376659 BOD1L1Q8NFC6 3051 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 FAM221AA4D161 298 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.18□□□□□ -1.1
TRIM39-202ENST00000376659 FARS2O95363 451 aaKnown RBP8.18□□□□□ -1.1
TRIM39-202ENST00000376659 DANCRP0C864 163 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 FUT3P21217 361 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 FCGR2CP31995 323 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 SOX8P57073 446 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 SP6Q3SY56 376 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF324BQ6AW86 544 aaPredicted RBP8.18□□□□□ -1.1
TRIM39-202ENST00000376659 RTN4IP1Q8WWV3 396 aaPredicted RBP8.18□□□□□ -1.1
TRIM39-202ENST00000376659 WDYHV1Q96HA8 205 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 PFDN5Q99471 154 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 ARRDC1-AS1Q9H2J1 176 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 TAF9BQ9HBM6 251 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 POMT1Q9Y6A1 747 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 SLC22A20A6NK97 555 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 C3orf80F5H4A9 247 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 TMEM50AO95807 157 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 IGHV3-9P01782 118 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 CCL2P13500 99 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 P2RY1P47900 373 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF585AQ6P3V2 769 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 LINC00596Q86U02 117 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 SGPP2Q8IWX5 399 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 SELENOHQ8IZQ5 122 aaKnown RBP8.18□□□□□ -1.1
TRIM39-202ENST00000376659 BOLLQ8N9W6 283 aaKnown RBP8.18□□□□□ -1.1
TRIM39-202ENST00000376659 BCL2L2Q92843 193 aaPredicted RBP8.18□□□□□ -1.1
TRIM39-202ENST00000376659 SLAMF9Q96A28 289 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 LOXL4Q96JB6 756 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 CACFD1Q9UGQ2 172 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 IL17BQ9UHF5 180 aa8.18□□□□□ -1.1
TRIM39-202ENST00000376659 F12P00748 615 aaPredicted RBP8.17□□□□□ -1.1
TRIM39-202ENST00000376659 HLA-HP01893 362 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 GUCA1AP43080 201 aaPredicted RBP8.17□□□□□ -1.1
TRIM39-202ENST00000376659 C9orf152Q5JTZ5 239 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 OR1K1Q8NGR3 316 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 FNDC9Q8TBE3 224 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 TMEM171Q8WVE6 324 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 LURAP1Q96LR2 239 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 OR51I2Q9H344 312 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 TAAR3PQ9P1P4 343 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 A0A1B0GW64 132 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 TRDCB7Z8K6 153 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 SYNGR1O43759 233 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 CDS2O95674 445 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 SCTP09683 121 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 OR8U9P0C7N5 309 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 AKR1C2P52895 323 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 PAX9P55771 341 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 DEFA6Q01524 100 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 AKR1C1Q04828 323 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 IL24Q13007 206 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 MPV17LQ2QL34 196 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF766Q5HY98 468 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 SLC25A26Q70HW3 274 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 OR8U1Q8NH10 309 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 HES4Q9HCC6 221 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 PRSS50Q9UI38 385 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 K7N7A8 449 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 FBXO24O75426 580 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 EIF3GO75821 320 aaKnown RBP eCLIP8.17□□□□□ -1.1
TRIM39-202ENST00000376659 SP1P08047 785 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 UCP1P25874 307 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 SNCAP37840 140 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 DEFA5Q01523 94 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 IL13RA2Q14627 380 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 SH3BGRL3Q9H299 93 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 METTL8Q9H825 291 aaKnown RBP8.17□□□□□ -1.1
TRIM39-202ENST00000376659 PLEKHA2Q9HB19 425 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 RHOFQ9HBH0 211 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF286AQ9HBT8 521 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 FAM96BQ9Y3D0 163 aa8.17□□□□□ -1.1
TRIM39-202ENST00000376659 IGSF23A1L1A6 192 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 MPPED1O15442 326 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 GPR137BO60478 399 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 GPM6AP51674 278 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 C3AR1Q16581 482 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 LPAL2Q16609 132 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 DPPA2Q7Z7J5 298 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 DEFB123Q8N688 67 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 OR5T2Q8NGG2 359 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 C2CD4CQ8TF44 421 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 EXTL1Q92935 676 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms