RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 TEP1Q99973 2627 aaKnown RBP11.55□□□□□ -0.56
DDR1-225ENST00000376568 FUOMA2VDF0 154 aa11.55□□□□□ -0.56
DDR1-225ENST00000376568 ST8SIA5O15466 376 aa11.55□□□□□ -0.56
DDR1-225ENST00000376568 CD300CQ08708 224 aa11.55□□□□□ -0.56
DDR1-225ENST00000376568 RBMS2Q15434 407 aaKnown RBP11.55□□□□□ -0.56
DDR1-225ENST00000376568 DPPA2Q7Z7J5 298 aa11.55□□□□□ -0.56
DDR1-225ENST00000376568 CCDC190Q86UF4 302 aa11.55□□□□□ -0.56
DDR1-225ENST00000376568 COQ8AQ8NI60 647 aa11.55□□□□□ -0.56
DDR1-225ENST00000376568 PHB2Q99623 299 aa11.55□□□□□ -0.56
DDR1-225ENST00000376568 C20orf85Q9H1P6 137 aa11.55□□□□□ -0.56
DDR1-225ENST00000376568 PIGMQ9H3S5 423 aa11.55□□□□□ -0.56
DDR1-225ENST00000376568 NSG2Q9Y328 171 aa11.55□□□□□ -0.56
DDR1-225ENST00000376568 NCBP2LA6PVI3 153 aaKnown RBP11.54□□□□□ -0.56
DDR1-225ENST00000376568 F5H0A9 414 aaPredicted RBP11.54□□□□□ -0.56
DDR1-225ENST00000376568 OR2H2O95918 312 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 LCN2P80188 198 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 IFITM3Q01628 133 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 ZMYND11Q15326 602 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 GLDNQ6ZMI3 551 aaPredicted RBP11.54□□□□□ -0.56
DDR1-225ENST00000376568 SDSLQ96GA7 329 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 PARP12Q9H0J9 701 aaKnown RBP11.54□□□□□ -0.56
DDR1-225ENST00000376568 NPAP1Q9NZP6 1156 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 MBD3L4A6NDZ8 208 aaPredicted RBP11.54□□□□□ -0.56
DDR1-225ENST00000376568 MBD3L3A6NE82 208 aaPredicted RBP11.54□□□□□ -0.56
DDR1-225ENST00000376568 MBD3L5A6NJ08 208 aaPredicted RBP11.54□□□□□ -0.56
DDR1-225ENST00000376568 MMP7P09237 267 aaPredicted RBP11.54□□□□□ -0.56
DDR1-225ENST00000376568 TLE4Q04727 773 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 MBD3L2Q8NHZ7 208 aaPredicted RBP11.54□□□□□ -0.56
DDR1-225ENST00000376568 AKIP1Q9NQ31 210 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDR1-225ENST00000376568 MTCH1Q9NZJ7 389 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 CNIH1O95406 144 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 IGF2P01344 180 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 GSG1LQ6UXU4 331 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 Q71RC1 249 aaPredicted RBP11.54□□□□□ -0.56
DDR1-225ENST00000376568 OR52L2PQ8NGH6 319 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 SLC25A38Q96DW6 304 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 UQCC2Q9BRT2 126 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 LPAR5Q9H1C0 372 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 WIPI2Q9Y4P8 454 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 USP24Q9UPU5 2620 aa11.54□□□□□ -0.56
DDR1-225ENST00000376568 SOX15O60248 233 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 SSTR5P35346 364 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 ERVK-16P61578 105 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 MEF2DQ14814 521 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 ESCO2Q56NI9 601 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 SHEQ5VZ18 495 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 REPIN1Q9BWE0 567 aaKnown RBP11.53□□□□□ -0.56
DDR1-225ENST00000376568 TRAV38-1A0A0B4J264 116 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 TRBV5-5A0A0J9YX44 114 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 LRP5LA4QPB2 252 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 ERVH48-1M5A8F1 160 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 HPXP02790 462 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 CD24P25063 80 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 ZNF79Q15937 498 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 SEM1Q6ZVN7 128 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 WDR31Q8NA23 367 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 SMIM4Q8WVI0 70 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 RTN4IP1Q8WWV3 396 aaPredicted RBP11.53□□□□□ -0.56
DDR1-225ENST00000376568 SNAPC3Q92966 411 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 KIR2DS1A0A191URI9 304 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 KIR2DS4P43632 304 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 KIR2DS1Q14954 304 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 IAH1Q2TAA2 248 aaPredicted RBP11.53□□□□□ -0.56
DDR1-225ENST00000376568 C22orf34Q6ZV56 151 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 TGIF2LYQ8IUE0 185 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 PINX1Q96BK5 328 aaKnown RBP11.53□□□□□ -0.56
DDR1-225ENST00000376568 SLC25A10Q9UBX3 287 aaPredicted RBP11.53□□□□□ -0.56
DDR1-225ENST00000376568 SLC25A15Q9Y619 301 aa11.53□□□□□ -0.56
DDR1-225ENST00000376568 TMEM30CPA0ZSE6 113 aa11.52□□□□□ -0.56
DDR1-225ENST00000376568 NPIPB13A6NJU9 1138 aa11.52□□□□□ -0.56
DDR1-225ENST00000376568 NPIPB4C9JG80 1138 aa11.52□□□□□ -0.56
DDR1-225ENST00000376568 CRHP06850 196 aa11.52□□□□□ -0.56
DDR1-225ENST00000376568 CLINT1Q14677 625 aa11.52□□□□□ -0.56
DDR1-225ENST00000376568 DCUN1D4Q92564 292 aa11.52□□□□□ -0.56
DDR1-225ENST00000376568 ARPC5LQ9BPX5 153 aa11.52□□□□□ -0.56
DDR1-225ENST00000376568 OR2D2Q9H210 308 aa11.52□□□□□ -0.56
DDR1-225ENST00000376568 RDH8Q9NYR8 311 aa11.52□□□□□ -0.56
DDR1-225ENST00000376568 IGHV1-69-2A0A0G2JMI3 117 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 FCGR3BO75015 233 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 PTTG1O95997 202 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 GLAP06280 429 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 RPS27AP62979 156 aaKnown RBP11.52□□□□□ -0.57
DDR1-225ENST00000376568 IZUMO4Q1ZYL8 232 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 MFSD4AQ8N468 514 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 ST6GALNAC3Q8NDV1 305 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 OR1L1Q8NH94 360 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 CCL19Q99731 98 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 ZNF649Q9BS31 505 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 KIAA1549Q9HCM3 1950 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 SPDEFO95238 335 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 TMEM268Q5VZI3 342 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 OR8H3Q8N146 312 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 UBAC2Q8NBM4 344 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 YIPF5Q969M3 257 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 OPA3Q9H6K4 179 aa11.52□□□□□ -0.57
DDR1-225ENST00000376568 RANBP3Q9H6Z4 567 aaPredicted RBP11.52□□□□□ -0.57
DDR1-225ENST00000376568 POM121CA8CG34 1229 aa11.51□□□□□ -0.57
DDR1-225ENST00000376568 APOBEC3AP31941 199 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms