RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 EIF2S3LQ2VIR3 472 aaKnown RBP12.5□□□□□ -0.41
MSH5-201ENST00000375703 ZNF600Q6ZNG1 722 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 Q6ZS49 121 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 LFNGQ8NES3 379 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 HS3ST6Q96QI5 342 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 GPHA2Q96T91 129 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 MAGT1Q9H0U3 335 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 RFNGQ9Y644 331 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 SSSCA1O60232 199 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 VAMP2P63027 116 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 SRYQ05066 204 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 TGIF1Q15583 401 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 CXorf66Q5JRM2 361 aaPredicted RBP12.5□□□□□ -0.41
MSH5-201ENST00000375703 GAPTQ8N292 157 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 SNIP1Q8TAD8 396 aaKnown RBP12.5□□□□□ -0.41
MSH5-201ENST00000375703 TMEM45BQ96B21 275 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 SLC25A31Q9H0C2 315 aa12.5□□□□□ -0.41
MSH5-201ENST00000375703 RYDENQ9NUL5 291 aaKnown RBP12.5□□□□□ -0.41
MSH5-201ENST00000375703 A0A1W2PPH5 198 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 ADAM20O43506 726 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 ATP6V0CP27449 155 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 FGF12P61328 243 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 RND3P61587 244 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 SRSF7Q16629 238 aaKnown RBP eCLIP12.49□□□□□ -0.415e-6■■■□□ 17.5
MSH5-201ENST00000375703 NRN1LQ496H8 165 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 DCAF12Q5T6F0 453 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 OR1J1Q8NGS3 322 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 NEK7Q8TDX7 302 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 RARRES2Q99969 163 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 NCKAP5O14513 1909 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 C5orf49A4QMS7 147 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 C5orf52A6NGY3 159 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 A6NLC8 198 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 ZNF724A8MTY0 619 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 HSPB6O14558 160 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 GPR37O15354 613 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 NAPSAO96009 420 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 SSPNQ14714 243 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 SPINK14Q6IE38 97 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 TMEM252Q8N6L7 170 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 ZFP62Q8NB50 900 aaPredicted RBP12.49□□□□□ -0.41
MSH5-201ENST00000375703 TAAR9Q96RI9 348 aa12.49□□□□□ -0.41
MSH5-201ENST00000375703 FGF23Q9GZV9 251 aaPredicted RBP12.49□□□□□ -0.41
MSH5-201ENST00000375703 A0A1B0GW64 132 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 SLC22A20A6NK97 555 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 PROB1E7EW31 1015 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 HSD17B6O14756 317 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 HSPA12AO43301 675 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 PITX3O75364 302 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 ARG1P05089 322 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 AGAP20933 346 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 SULT1A1P50225 295 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 FOXO1Q12778 655 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 CEACAM21Q3KPI0 293 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 MRPL21Q7Z2W9 205 aaKnown RBP12.48□□□□□ -0.41
MSH5-201ENST00000375703 SAXO1Q8IYX7 474 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 FAM24BQ8N5W8 94 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 ABHD14AQ9BUJ0 271 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 CCL28Q9NRJ3 127 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 LYRM2Q9NU23 88 aaPredicted RBP12.48□□□□□ -0.41
MSH5-201ENST00000375703 MTCH1Q9NZJ7 389 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 CRIM1Q9NZV1 1036 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 IGKV1D-13A0A0B4J2D9 117 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 ZNF732B4DXR9 585 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 PRSS44E7EML9 344 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 CER1O95813 267 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 HLA-HP01893 362 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 IGKV1-13P0DP09 117 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 ITGA3P26006 1051 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 CCL20P78556 96 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 RHEBQ15382 184 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 TSC22D1Q15714 1073 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 SOHLH1Q5JUK2 328 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 MKXQ8IYA7 352 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 ZDHHC23Q8IYP9 409 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 IL36RNQ9UBH0 155 aa12.48□□□□□ -0.41
MSH5-201ENST00000375703 TRAPPC2LH3BP13 241 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 SERPINA7P05543 415 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 ACAA1P09110 424 aaPredicted RBP12.47□□□□□ -0.41
MSH5-201ENST00000375703 ZNF14P17017 642 aaPredicted RBP12.47□□□□□ -0.41
MSH5-201ENST00000375703 RAB5AP20339 215 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 HERPUD1Q15011 391 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 SUMF2Q8NBJ7 301 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 OR5C1Q8NGR4 320 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 TMEM171Q8WVE6 324 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 PRRG4Q9BZD6 226 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 LINC00470Q9BZP3 86 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 SMDT1Q9H4I9 107 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 LRFN1Q9P244 771 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 PUS1Q9Y606 427 aaKnown RBP eCLIP12.47□□□□□ -0.41
MSH5-201ENST00000375703 KIR2DS1A0A191URI9 304 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 RBFOX3A6NFN3 312 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 B4E171 279 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 CST7O76096 145 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 CBR1P16152 277 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 VDAC1P21796 283 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 TSPAN7P41732 249 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 KIR2DS4P43632 304 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 ID3Q02535 119 aa12.47□□□□□ -0.41
MSH5-201ENST00000375703 KIR2DS1Q14954 304 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms